AT2G38170 (RCI4, CAX1, ATCAX1)

Aliases : RCI4, CAX1, ATCAX1

Description : cation exchanger 1

Gene families : OG0001218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001218_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G38170
Cluster	HCCA: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method
Cre16.g649466	atcax2, CAX2	Solute transport.carrier-mediated transport.CDF...	0.02	OrthoFinder output from all 47 species
LOC_Os02g21009.2	CAX1-LIKE,...	cation antiporter (CAX)	0.04	OrthoFinder output from all 47 species
MA_40197g0010	atcax2, CAX2	cation antiporter (CAX)	0.03	OrthoFinder output from all 47 species
Msp_g06119	ATCAX5, CAX5	cation antiporter *(CAX) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g123790.4.1	ATCAX5, CAX5,...	cation antiporter (CAX)	0.04	OrthoFinder output from all 47 species
Spa_g12335	ATCAX5, CAX5	cation antiporter *(CAX) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g19676	ATCAX5, CAX5	cation antiporter *(CAX) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g47884	ATCAX5, CAX5	cation antiporter *(CAX) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	TAS	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006816	calcium ion transport	IDA	Interproscan
BP	GO:0006816	calcium ion transport	IGI	Interproscan
BP	GO:0006816	calcium ion transport	RCA	Interproscan
BP	GO:0006833	water transport	RCA	Interproscan
BP	GO:0006873	cellular monoatomic ion homeostasis	None	Extended
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0006882	cellular zinc ion homeostasis	IMP	Interproscan
BP	GO:0006882	cellular zinc ion homeostasis	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007030	Golgi organization	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009624	response to nematode	RCA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009631	cold acclimation	IMP	Interproscan
BP	GO:0009651	response to salt stress	IMP	Interproscan
BP	GO:0009651	response to salt stress	RCA	Interproscan
CC	GO:0009705	plant-type vacuole membrane	IDA	Interproscan
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009746	response to hexose	None	Extended
BP	GO:0009750	response to fructose	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015085	calcium ion transmembrane transporter activity	IGI	Interproscan
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015297	antiporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015368	calcium:monoatomic cation antiporter activity	ISS	Interproscan
MF	GO:0015369	calcium:proton antiporter activity	IDA	Interproscan
MF	GO:0015369	calcium:proton antiporter activity	IGI	Interproscan
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019757	glycosinolate metabolic process	None	Extended
BP	GO:0019758	glycosinolate biosynthetic process	None	Extended
BP	GO:0019760	glucosinolate metabolic process	None	Extended
BP	GO:0019761	glucosinolate biosynthetic process	RCA	Interproscan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0030003	cellular monoatomic cation homeostasis	RCA	Interproscan
BP	GO:0030026	cellular manganese ion homeostasis	IMP	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0032880	regulation of protein localization	RCA	Interproscan
BP	GO:0034284	response to monosaccharide	None	Extended
BP	GO:0042044	fluid transport	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	RCA	Interproscan
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
BP	GO:0046916	cellular transition metal ion homeostasis	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051139	metal cation:proton antiporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0055062	phosphate ion homeostasis	IGI	Interproscan
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055069	zinc ion homeostasis	None	Extended
BP	GO:0055071	manganese ion homeostasis	None	Extended
BP	GO:0055076	transition metal ion homeostasis	None	Extended
BP	GO:0055080	monoatomic cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0060341	regulation of cellular localization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140828	metal cation:monoatomic cation antiporter activity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000293	ferric-chelate reductase activity	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016722	oxidoreductase activity, acting on metal ions	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004837	NaCa_Exmemb	288	429
IPR004837	NaCa_Exmemb	96	257

External Links

No external refs found!

AT2G38170 (RCI4, CAX1, ATCAX1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation