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  5. AT2G35190

AT2G35190 (NSPN11, ATNPSN11, NPSN11)


Aliases : NSPN11, ATNPSN11, NPSN11

Description : novel plant snare 11


Gene families : OG0002530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G35190

Target Alias Description ECC score Gene Family Method Actions
Adi_g108234 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Aev_g17807 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aev_g24174 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Als_g26661 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Cba_g07338 NPSN12, ATNPSN12 Qb-type NPSN-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ceric.35G009000.1 NPSN13,... Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ehy_g07332 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
GSVIVT01013276001 NSPN11, ATNPSN11, NPSN11 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
GSVIVT01017683001 NPSN13, ATNPSN13 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Gb_07270 NPSN13, ATNPSN13 Qb-SNARE component NPSN11 of SNARE cell-plate vesicle... 0.04 OrthoFinder output from all 47 species
LOC_Os07g44350.1 NPSN13,... NPSN group Qb-type SNARE protein 0.04 OrthoFinder output from all 47 species
Len_g13457 NPSN12, ATNPSN12 Qb-type NPSN-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Len_g48119 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Msp_g05037 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Nbi_g19000 NPSN12, ATNPSN12 Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Pir_g01893 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pp3c15_360V3.1 NPSN13,... novel plant snare 13 0.01 OrthoFinder output from all 47 species
Solyc08g077550.3.1 NSPN11,... Qb-SNARE component NPSN11 of SNARE cell-plate vesicle... 0.04 OrthoFinder output from all 47 species
Zm00001e035664_P001 NPSN13,... NPSN group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity ISS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
MF GO:0008565 obsolete protein transporter activity ISS Interproscan
CC GO:0009504 cell plate IDA Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0005513 detection of calcium ion IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007349 cellularization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009558 embryo sac cellularization IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0010005 cortical microtubule, transverse to long axis IEP HCCA
BP GO:0010099 regulation of photomorphogenesis IEP HCCA
BP GO:0010100 negative regulation of photomorphogenesis IEP HCCA
BP GO:0010289 homogalacturonan biosynthetic process IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
BP GO:0010394 homogalacturonan metabolic process IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015450 protein-transporting ATPase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019722 calcium-mediated signaling IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0045489 pectin biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051211 anisotropic cell growth IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0052325 cell wall pectin biosynthetic process IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
CC GO:0055028 cortical microtubule IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
BP GO:1901420 negative regulation of response to alcohol IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
BP GO:1905958 negative regulation of cellular response to alcohol IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000030 regulation of response to red or far red light IEP HCCA
InterPro domains Description Start Stop
IPR005606 Sec20 152 232
No external refs found!