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  5. AT2G34020

AT2G34020


Description : Calcium-binding EF-hand family protein


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G34020
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT1G53210 No alias sodium/calcium exchanger family protein /... 0.02 OrthoFinder output from all 47 species
Ala_g09137 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21646 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07327.t1 Aspi01Gene07327 cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07409.t1 Aspi01Gene07409 cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34998.t1 Aspi01Gene34998 cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G076200.1 Ceric.20G076200 cation exchanger *(NCL/EF-CAX) & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01014240001 No alias Solute transport.carrier-mediated transport.CDF... 0.05 OrthoFinder output from all 47 species
GSVIVT01020661001 No alias Solute transport.carrier-mediated transport.CDF... 0.03 OrthoFinder output from all 47 species
GSVIVT01021164001 No alias Solute transport.carrier-mediated transport.CDF... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11414.1 LOC_Os01g11414 cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Len_g55225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_104140g0010 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
MA_104140g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g03300.1 No alias cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Mp8g02300.1 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Mp8g02310.1 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Pnu_g12151 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59906 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g006260.4.1 Solyc03g006260 cation exchanger (NCL/EF-CAX) 0.04 OrthoFinder output from all 47 species
Solyc07g062700.3.1 Solyc07g062700 cation exchanger (NCL/EF-CAX) 0.04 OrthoFinder output from all 47 species
Zm00001e026032_P005 Zm00001e026032 cation exchanger (NCL/EF-CAX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0009736 cytokinin-activated signaling pathway RCA Interproscan
BP GO:0046685 response to arsenic-containing substance RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008381 mechanosensitive monoatomic ion channel activity IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016630 protochlorophyllide reductase activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0030856 regulation of epithelial cell differentiation IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0045604 regulation of epidermal cell differentiation IEP HCCA
BP GO:0045682 regulation of epidermis development IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0050982 detection of mechanical stimulus IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 329 352
No external refs found!