1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G28340

AT2G28340 (GATA13)


Aliases : GATA13

Description : GATA transcription factor 13


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G28340
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00155p00085360 GATA11,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT3G20750 GATA29 GATA transcription factor 29 0.04 OrthoFinder output from all 47 species
AT3G45170 GATA14 GATA transcription factor 14 0.05 OrthoFinder output from all 47 species
Adi_g065556 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51912.t1 GATA9, Aspi01Gene51912 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05826 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15344 GATA15 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G027400.1 GATA12, Ceric.27G027400 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g06344 GATA5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_24250 GATA9 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Gb_25568 GATA20 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os03g05160.1 BME3-ZF, BME3,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os05g44400.1 GATA12, LOC_Os05g44400 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
MA_82238g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g31511 GATA2 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009072 GATA4 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Solyc08g066510.3.1 GATA12, Solyc08g066510 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Solyc10g018560.2.1 GATA4, Solyc10g018560 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Zm00001e007391_P002 GATA5, Zm00001e007391 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e009216_P001 GATA4, Zm00001e009216 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e026560_P001 GATA20, Zm00001e026560 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e027439_P001 GATA12, Zm00001e027439 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e039469_P001 GATA12, Zm00001e039469 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e041332_P001 GATA5, Zm00001e041332 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000741 karyogamy IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006935 chemotaxis IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009823 cytokinin catabolic process IEP HCCA
BP GO:0009830 cell wall modification involved in abscission IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
BP GO:0010183 pollen tube guidance IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
MF GO:0016405 CoA-ligase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016878 acid-thiol ligase activity IEP HCCA
MF GO:0018858 benzoate-CoA ligase activity IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0040011 locomotion IEP HCCA
BP GO:0040019 positive regulation of embryonic development IEP HCCA
BP GO:0042330 taxis IEP HCCA
BP GO:0042447 hormone catabolic process IEP HCCA
BP GO:0044277 cell wall disassembly IEP HCCA
BP GO:0045995 regulation of embryonic development IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050918 positive chemotaxis IEP HCCA
BP GO:0060771 phyllotactic patterning IEP HCCA
BP GO:0060772 leaf phyllotactic patterning IEP HCCA
BP GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 193 226
No external refs found!