AT2G28190 (CZSOD2, CSD2)

Aliases : CZSOD2, CSD2

Description : copper/zinc superoxide dismutase 2

Gene families : OG0000525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G28190
Cluster	HCCA: Cluster_320

Target	Alias	Description	ECC score	Gene Family Method
Dcu_g29162	CSD1	EC_1.15 oxidoreductase acting on superoxide as acceptor...	0.02	OrthoFinder output from all 47 species
Gb_38962	CZSOD2, CSD2	copper/zinc superoxide dismutase	0.04	OrthoFinder output from all 47 species
Lfl_g30217	CSD1	EC_1.15 oxidoreductase acting on superoxide as acceptor...	0.01	OrthoFinder output from all 47 species
Ppi_g19752	CSD1	EC_1.15 oxidoreductase acting on superoxide as acceptor...	0.02	OrthoFinder output from all 47 species
Ppi_g47794	CZSOD2, CSD2	EC_1.15 oxidoreductase acting on superoxide as acceptor...	0.02	OrthoFinder output from all 47 species
Tin_g19199	CSD1	EC_1.15 oxidoreductase acTing on superoxide as acceptor...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004784	superoxide dismutase activity	IDA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IBA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
BP	GO:0006801	superoxide metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006979	response to oxidative stress	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IBA	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009407	toxin catabolic process	RCA	Interproscan
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	IEP	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010039	response to iron ion	IEP	Interproscan
BP	GO:0010193	response to ozone	None	Extended
BP	GO:0010224	response to UV-B	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
MF	GO:0016209	antioxidant activity	None	Extended
BP	GO:0016441	post-transcriptional gene silencing	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019430	removal of superoxide radicals	IBA	Interproscan
BP	GO:0019430	removal of superoxide radicals	IC	Interproscan
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0031047	RNA-mediated gene silencing	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0034599	cellular response to oxidative stress	IEP	Interproscan
BP	GO:0034614	cellular response to reactive oxygen species	None	Extended
BP	GO:0034644	cellular response to UV	None	Extended
BP	GO:0035194	RNA-mediated post-transcriptional gene silencing	None	Extended
BP	GO:0035195	miRNA-mediated gene silencing	IEP	Interproscan
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0046688	response to copper ion	IEP	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0048046	apoplast	IDA	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0062197	cellular response to chemical stress	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071322	cellular response to carbohydrate stimulus	None	Extended
BP	GO:0071324	cellular response to disaccharide stimulus	None	Extended
BP	GO:0071329	cellular response to sucrose stimulus	IEP	Interproscan
BP	GO:0071457	cellular response to ozone	IEP	Interproscan
BP	GO:0071470	cellular response to osmotic stress	None	Extended
BP	GO:0071472	cellular response to salt stress	IEP	Interproscan
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071484	cellular response to light intensity	IEP	Interproscan
BP	GO:0071493	cellular response to UV-B	IEP	Interproscan
BP	GO:0072593	reactive oxygen species metabolic process	None	Extended
BP	GO:0098754	detoxification	None	Extended
BP	GO:0098869	cellular oxidant detoxification	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1990748	cellular detoxification	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006873	cellular monoatomic ion homeostasis	IEP	HCCA
BP	GO:0006875	cellular metal ion homeostasis	IEP	HCCA
BP	GO:0006878	cellular copper ion homeostasis	IEP	HCCA
BP	GO:0015680	protein maturation by copper ion transfer	IEP	HCCA
MF	GO:0016530	metallochaperone activity	IEP	HCCA
MF	GO:0016531	copper chaperone activity	IEP	HCCA
MF	GO:0016532	superoxide dismutase copper chaperone activity	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
BP	GO:0030003	cellular monoatomic cation homeostasis	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
BP	GO:0050801	monoatomic ion homeostasis	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055070	copper ion homeostasis	IEP	HCCA
BP	GO:0055076	transition metal ion homeostasis	IEP	HCCA
BP	GO:0055080	monoatomic cation homeostasis	IEP	HCCA
BP	GO:0055082	cellular chemical homeostasis	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001424	SOD_Cu_Zn_dom	74	211

External Links

No external refs found!

AT2G28190 (CZSOD2, CSD2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation