AT2G25900 (ATTZF1, ATCTH)

Aliases : ATTZF1, ATCTH

Description : Zinc finger C-x8-C-x5-C-x3-H type family protein

Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G25900

Target	Alias	Description	ECC score	Gene Family Method
Ceric.04G078500.1	Ceric.04G078500	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Ceric.07G046400.1	Ceric.07G046400	regulatory factor *(TZF) of mRNA stress granule...	0.05	OrthoFinder output from all 47 species
Ceric.33G056800.1	ATTZF1, ATCTH,...	regulatory factor *(TZF) of mRNA stress granule...	0.05	OrthoFinder output from all 47 species
Dde_g24267	ATTZF1, ATCTH	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
GSVIVT01035331001	No alias	RNA biosynthesis.transcriptional activation.C3H zinc...	0.11	OrthoFinder output from all 47 species
Ore_g25247	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.04	OrthoFinder output from all 47 species
Ore_g30495	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.05	OrthoFinder output from all 47 species
Pir_g16628	ATTZF1, ATCTH	regulatory factor *(TZF) of mRNA stress granule...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017049	ATTZF1, ATCTH	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Smo441947	No alias	RNA biosynthesis.transcriptional activation.C3H zinc...	0.04	OrthoFinder output from all 47 species
Smo443970	No alias	RNA biosynthesis.transcriptional activation.C3H zinc...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IDA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003723	RNA binding	IDA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0005777	peroxisome	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT2G25900 (ATTZF1, ATCTH)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation