AT2G25110 (SDF2, AtSDF2, ATSDL)

Aliases : SDF2, AtSDF2, ATSDL

Description : stromal cell-derived factor 2-like protein precursor

Gene families : OG0002033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002033_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G25110

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene08025.t1	SDF2, AtSDF2,...	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.04	OrthoFinder output from all 47 species
Azfi_s0096.g043707	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.04	OrthoFinder output from all 47 species
Azfi_s0100.g044339	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.05	OrthoFinder output from all 47 species
Cba_g09435	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.03	OrthoFinder output from all 47 species
Cba_g24020	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000215.14	SDF2, AtSDF2, ATSDL	Stromal cell-derived factor 2-like protein...	0.05	OrthoFinder output from all 47 species
Cre13.g571750	SDF2, AtSDF2, ATSDL	Stromal cell-derived factor 2-like protein...	0.16	OrthoFinder output from all 47 species
Dac_g45547	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.03	OrthoFinder output from all 47 species
Dcu_g21401	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.04	OrthoFinder output from all 47 species
Dde_g09361	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.04	OrthoFinder output from all 47 species
Gb_21723	SDF2, AtSDF2, ATSDL	component SDF2 of ERdj3B-BiP-SDF2 chaperone complex	0.03	OrthoFinder output from all 47 species
LOC_Os08g17680.1	SDF2, AtSDF2,...	component SDF2 of ERdj3B-BiP-SDF2 chaperone complex	0.07	OrthoFinder output from all 47 species
LOC_Os08g34190.1	SDF2, AtSDF2,...	component SDF2 of ERdj3B-BiP-SDF2 chaperone complex	0.21	OrthoFinder output from all 47 species
Len_g01083	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.02	OrthoFinder output from all 47 species
Len_g21242	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.03	OrthoFinder output from all 47 species
Mp7g08270.1	SDF2, AtSDF2, ATSDL	component SDF2 of ERdj3B-BiP-SDF2 chaperone complex	0.08	OrthoFinder output from all 47 species
Msp_g26695	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.03	OrthoFinder output from all 47 species
Nbi_g34997	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.18	OrthoFinder output from all 47 species
Pir_g03289	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.03	OrthoFinder output from all 47 species
Pnu_g25008	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.03	OrthoFinder output from all 47 species
Smo271847	SDF2, AtSDF2, ATSDL	Stromal cell-derived factor 2-like protein...	0.03	OrthoFinder output from all 47 species
Solyc03g117020.4.1	SDF2, AtSDF2,...	component SDF2 of ERdj3B-BiP-SDF2 chaperone complex	0.1	OrthoFinder output from all 47 species
Spa_g52416	SDF2, AtSDF2, ATSDL	component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &...	0.14	OrthoFinder output from all 47 species
Zm00001e022473_P002	SDF2, AtSDF2,...	component SDF2 of ERdj3B-BiP-SDF2 chaperone complex	0.14	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
BP	GO:0006457	protein folding	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009408	response to heat	RCA	Interproscan
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009627	systemic acquired resistance	RCA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
CC	GO:0016020	membrane	ISS	Interproscan
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034976	response to endoplasmic reticulum stress	RCA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042542	response to hydrogen peroxide	RCA	Interproscan
BP	GO:0042742	defense response to bacterium	IMP	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050832	defense response to fungus	IMP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0052033	obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	IMP	Interproscan
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000741	karyogamy	IEP	HCCA
MF	GO:0003756	protein disulfide isomerase activity	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
CC	GO:0005788	endoplasmic reticulum lumen	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0006984	ER-nucleus signaling pathway	IEP	HCCA
BP	GO:0006997	nucleus organization	IEP	HCCA
MF	GO:0008320	protein transmembrane transporter activity	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009553	embryo sac development	IEP	HCCA
BP	GO:0009566	fertilization	IEP	HCCA
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0010038	response to metal ion	IEP	HCCA
BP	GO:0010197	polar nucleus fusion	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	HCCA
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
CC	GO:0030134	COPII-coated ER to Golgi transport vesicle	IEP	HCCA
CC	GO:0030135	coated vesicle	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
BP	GO:0048284	organelle fusion	IEP	HCCA
BP	GO:0048868	pollen tube development	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140318	protein transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016093	MIR_motif	78	201

External Links

No external refs found!

AT2G25110 (SDF2, AtSDF2, ATSDL)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation