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  5. AT2G23800

AT2G23800 (GGPS2, GGPS5)


Aliases : GGPS2, GGPS5

Description : geranylgeranyl pyrophosphate synthase 2


Gene families : OG0001174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G23800
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00566p00010050 GGPS1,... Secondary metabolism.terpenoids.methylerythritol... 0.02 OrthoFinder output from all 47 species
AT3G20160 No alias Terpenoid synthases superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G29430 No alias Terpenoid synthases superfamily protein 0.05 OrthoFinder output from all 47 species
Aspi01Gene01995.t1 GGPS1, Aspi01Gene01995 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Aspi01Gene42399.t1 GGPS1, Aspi01Gene42399 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Gb_39712 GGPS1 isoprenyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
LOC_Os01g14630.1 GGPS1, LOC_Os01g14630 isoprenyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
LOC_Os07g39270.1 GGPS1, LOC_Os07g39270 isoprenyl diphosphate synthase 0.06 OrthoFinder output from all 47 species
MA_1011718g0010 GGPS1 isoprenyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
MA_10429756g0010 GGPS1 isoprenyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
MA_543467g0010 No alias isoprenyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
Pnu_g25568 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Sam_g06903 No alias isoprenyl diphosphate synthase *(IDS) & original... 0.02 OrthoFinder output from all 47 species
Tin_g01860 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004311 farnesyltranstransferase activity IDA Interproscan
MF GO:0004311 farnesyltranstransferase activity IGI Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
BP GO:0006744 ubiquinone biosynthetic process RCA Interproscan
BP GO:0008299 isoprenoid biosynthetic process TAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
MF GO:0004084 branched-chain-amino-acid transaminase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009395 phospholipid catabolic process IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009859 pollen hydration IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0019953 sexual reproduction IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045471 response to ethanol IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
CC GO:0070505 pollen coat IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0080166 stomium development IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 112 346
No external refs found!