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Description : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Gene families : OG0000822 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000822_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G23520 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g023415 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G039100.1 | Ceric.27G039100 | not classified & original description: pacid=50605400... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01005083001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009585001 | No alias | No description available | 0.09 | OrthoFinder output from all 47 species | |
| Len_g20310 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g20714 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g03476 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17042 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g38687 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005886 | plasma membrane | IDA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000930 | gamma-tubulin complex | IEP | HCCA |
| BP | GO:0002376 | immune system process | IEP | HCCA |
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| MF | GO:0003730 | mRNA 3'-UTR binding | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| CC | GO:0005635 | nuclear envelope | IEP | HCCA |
| CC | GO:0005819 | spindle | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006955 | immune response | IEP | HCCA |
| BP | GO:0007020 | microtubule nucleation | IEP | HCCA |
| BP | GO:0007154 | cell communication | IEP | HCCA |
| BP | GO:0007267 | cell-cell signaling | IEP | HCCA |
| BP | GO:0007276 | gamete generation | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| BP | GO:0009561 | megagametogenesis | IEP | HCCA |
| BP | GO:0009615 | response to virus | IEP | HCCA |
| BP | GO:0009616 | RNAi-mediated antiviral immune response | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| CC | GO:0009898 | cytoplasmic side of plasma membrane | IEP | HCCA |
| BP | GO:0010267 | ta-siRNA processing | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016441 | post-transcriptional gene silencing | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0023052 | signaling | IEP | HCCA |
| BP | GO:0030422 | siRNA processing | IEP | HCCA |
| BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
| BP | GO:0032875 | regulation of DNA endoreduplication | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0035194 | RNA-mediated post-transcriptional gene silencing | IEP | HCCA |
| BP | GO:0035196 | miRNA processing | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0045087 | innate immune response | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0048609 | multicellular organismal reproductive process | IEP | HCCA |
| BP | GO:0051302 | regulation of cell division | IEP | HCCA |
| BP | GO:0051607 | defense response to virus | IEP | HCCA |
| BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
| BP | GO:0070918 | regulatory ncRNA processing | IEP | HCCA |
| BP | GO:0090329 | regulation of DNA-templated DNA replication | IEP | HCCA |
| CC | GO:0098552 | side of membrane | IEP | HCCA |
| CC | GO:0098562 | cytoplasmic side of membrane | IEP | HCCA |
| BP | GO:0140546 | defense response to symbiont | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |