AT2G22890

Description : Kua-ubiquitin conjugating enzyme hybrid localisation domain

Gene families : OG0005593 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005593_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G22890
Cluster	HCCA: Cluster_241

Target	Alias	Description	ECC score	Gene Family Method
Aop_g02813	FAD4, FADA	trans-delta-3-hexadecenoic acid phosphatidylglycerol...	0.02	OrthoFinder output from all 47 species
Aspi01Gene66918.t1	FAD4, FADA,...	trans-delta-3-hexadecenoic acid phosphatidylglycerol...	0.03	OrthoFinder output from all 47 species
Dcu_g11892	FAD4, FADA	trans-delta-3-hexadecenoic acid phosphatidylglycerol...	0.04	OrthoFinder output from all 47 species
LOC_Os08g08850.1	FAD4, FADA,...	delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase	0.03	OrthoFinder output from all 47 species
Pnu_g32802	FAD4, FADA	trans-delta-3-hexadecenoic acid phosphatidylglycerol...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	HCCA
MF	GO:0004312	fatty acid synthase activity	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0009266	response to temperature stimulus	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
MF	GO:0009922	fatty acid elongase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0042335	cuticle development	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019547	Lipid_desat	105	273

External Links

No external refs found!