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  5. AT2G18600

AT2G18600


Description : Ubiquitin-conjugating enzyme family protein


Gene families : OG0002378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G18600

Target Alias Description ECC score Gene Family Method Actions
Ala_g37683 RCE1 E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.01 OrthoFinder output from all 47 species
Cre08.g370850 RCE1 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01031919001 RCE1 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_16788 RCE1 RUB conjugation E2 protein (RCE1) 0.03 OrthoFinder output from all 47 species
Lfl_g06436 RCE1 E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.02 OrthoFinder output from all 47 species
Mp2g16580.1 RCE1 RUB conjugation E2 protein (RCE1) 0.03 OrthoFinder output from all 47 species
Solyc04g079970.3.1 RCE1, Solyc04g079970 RUB conjugation E2 protein (RCE1) 0.02 OrthoFinder output from all 47 species
Solyc06g007497.1.1 RCE1, Solyc06g007497 RUB conjugation E2 protein (RCE1) 0.01 OrthoFinder output from all 47 species
Tin_g01525 RCE1 E2 RUB ubiquiTin-conjugaTing enzyme *(RCE1) & original... 0.01 OrthoFinder output from all 47 species
Zm00001e030234_P001 RCE1, Zm00001e030234 RUB conjugation E2 protein (RCE1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
BP GO:0006301 postreplication repair RCA Interproscan
MF GO:0019787 ubiquitin-like protein transferase activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 35 170
No external refs found!