AT2G17730 (NIP2)

Aliases : NIP2

Description : NEP-interacting protein 2

Gene families : OG0001320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001320_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G17730
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
Ala_g01022	No alias	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Aop_g03745	No alias	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene00810.t1	Aspi01Gene00810	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.04	OrthoFinder output from all 47 species
Aspi01Gene38278.t2	Aspi01Gene38278	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
GSVIVT01037651001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.04	OrthoFinder output from all 47 species
Gb_35043	No alias	NEP1-interacting protein 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os08g43670.1	LOC_Os08g43670	NEP1-interacting protein 2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os09g37050.1	NIP2, LOC_Os09g37050	NEP1-interacting protein 1 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Len_g00401	No alias	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.04	OrthoFinder output from all 47 species
Nbi_g24955	No alias	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.02	OrthoFinder output from all 47 species
Pir_g10027	No alias	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Pnu_g11731	No alias	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Sam_g38144	No alias	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.02	OrthoFinder output from all 47 species
Solyc03g033330.3.1	Solyc03g033330	NEP1-interacting protein 1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Tin_g02435	No alias	RING-H2-class ATL-subclass E3 ubiquiTin ligase &...	0.03	OrthoFinder output from all 47 species
Tin_g03831	No alias	RING-H2-class ATL-subclass E3 ubiquiTin ligase &...	0.06	OrthoFinder output from all 47 species
Zm00001e015805_P001	Zm00001e015805	NEP1-interacting protein-like 2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009299	mRNA transcription	IPI	Interproscan
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	IEP	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
CC	GO:0019867	outer membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031351	obsolete integral component of plastid membrane	IDA	Interproscan
CC	GO:0031968	organelle outer membrane	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027367	Gly-zipper_YMGG	55	91
IPR001841	Znf_RING	194	238

External Links

No external refs found!

AT2G17730 (NIP2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation