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AT2G14850


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33890.2); Has 140 Blast hits to 132 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 133; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).


Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G14850
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Aop_g10961 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Dcu_g22539 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Dde_g02191 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
GSVIVT01037861001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Gb_32111 No alias component ADA1 of SAGA transcription co-activator complex 0.02 OrthoFinder output from all 47 species
LOC_Os03g55450.1 LOC_Os03g55450 component ADA1 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species
Pir_g61284 No alias component *(ADA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012682 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Solyc02g064710.3.1 Solyc02g064710 component ADA1 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Solyc06g068610.3.1 Solyc06g068610 component ADA1 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Tin_g01184 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Zm00001e003039_P001 Zm00001e003039 component ADA1 of SAGA transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Zm00001e005767_P001 Zm00001e005767 component ADA1 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Zm00001e011984_P001 Zm00001e011984 component ADA1 of SAGA transcription co-activator complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000373 Group II intron splicing IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
MF GO:0004300 enoyl-CoA hydratase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
CC GO:0005623 obsolete cell IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008419 RNA lariat debranching enzyme activity IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009649 entrainment of circadian clock IEP HCCA
BP GO:0009903 chloroplast avoidance movement IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0043153 entrainment of circadian clock by photoperiod IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0097031 obsolete mitochondrial respiratory chain complex I biogenesis IEP HCCA
BP GO:0097034 obsolete mitochondrial respiratory chain complex IV biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 8 246
No external refs found!