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AT2G12290


Description : BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT4G19700.1); Has 66 Blast hits to 66 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G12290
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AT1G60610 No alias SBP (S-ribonuclease binding protein) family protein 0.06 OrthoFinder output from all 47 species
Adi_g039739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g057968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18402 SBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29705 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005184_P001 Zm00001e005184 BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!