1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G06200

AT2G06200 (GRF6, AtGRF6)


Aliases : GRF6, AtGRF6

Description : growth-regulating factor 6


Gene families : OG0000528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000528_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G06200
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00189460 GRF4, AtGRF4,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 OrthoFinder output from all 47 species
AMTR_s00065p00092420 GRF1, AtGRF1,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.04 OrthoFinder output from all 47 species
AMTR_s00069p00196720 GRF1, AtGRF1,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.05 OrthoFinder output from all 47 species
AT3G13960 GRF5, AtGRF5 growth-regulating factor 5 0.05 OrthoFinder output from all 47 species
Adi_g021141 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Aev_g39822 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Ala_g26167 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Als_g13520 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Als_g16124 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.06 OrthoFinder output from all 47 species
Aop_g11516 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene22371.t1 GRF5, AtGRF5,... component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene35340.t1 GRF1, AtGRF1,... component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene37446.t1 GRF5, AtGRF5,... component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene47276.t1 GRF1, AtGRF1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0256.g060519 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Cba_g07600 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Ceric.15G044200.1 GRF3, AtGRF3,... component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Ceric.15G046200.1 GRF1, AtGRF1,... component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Ceric.36G051200.1 GRF5, AtGRF5,... component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Dac_g14130 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Dac_g23460 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g14903 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g15470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16923 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g19232 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01015095001 GRF5, AtGRF5 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 OrthoFinder output from all 47 species
Gb_20400 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.05 OrthoFinder output from all 47 species
Gb_26136 GRF5, AtGRF5 component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g47140.1 GRF1, AtGRF1,... component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
LOC_Os04g48510.1 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g29980.1 GRF2, AtGRF2,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Len_g10947 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Len_g36054 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Len_g36239 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Len_g49752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_111469g0010 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
MA_18836g0010 GRF5, AtGRF5 component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
MA_33661g0010 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
Mp8g16900.1 GRF2, AtGRF2 component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
Nbi_g38721 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.06 OrthoFinder output from all 47 species
Ppi_g06956 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Ppi_g30072 GRF3, AtGRF3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63627 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002301 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011382 No alias not classified & original description: CDS=103-1059 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019225 No alias not classified & original description: CDS=695-3535 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0161.g023900 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Solyc07g041640.3.1 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Solyc10g083510.2.1 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Spa_g17990 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Tin_g11764 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Tin_g32090 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g45753 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Zm00001e015436_P001 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
Zm00001e023229_P001 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Zm00001e023769_P003 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.05 OrthoFinder output from all 47 species
Zm00001e030774_P001 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Zm00001e036224_P001 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0048366 leaf development TAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0009624 response to nematode IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009957 epidermal cell fate specification IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022403 cell cycle phase IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0044848 biological phase IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051322 anaphase IEP HCCA
CC GO:0055028 cortical microtubule IEP HCCA
BP GO:0061062 regulation of nematode larval development IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0072686 mitotic spindle IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR014978 Gln-Leu-Gln_QLQ 6 39
IPR014977 WRC_dom 81 122
No external refs found!