AT2G03160 (SK19, ASK19)

Aliases : SK19, ASK19

Description : SKP1-like 19

Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G03160

Target	Alias	Description	ECC score	Gene Family Method
AT2G03190	ASK16, SK16	SKP1-like 16	0.07	OrthoFinder output from all 47 species
AT2G20160	MEO, ASK17	E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein	0.06	OrthoFinder output from all 47 species
AT2G25700	ASK3, SK3	SKP1-like 3	0.06	OrthoFinder output from all 47 species
AT3G53060	SK6, ASK6	SKP1-like 6	0.04	OrthoFinder output from all 47 species
AT3G60020	SK5, ASK5	SKP1-like 5	0.05	OrthoFinder output from all 47 species
Ceric.20G071600.1	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
MA_10316948g0010	ASK2, SKP1B	target protein binding component SKP1/ASK1 of...	0.03	OrthoFinder output from all 47 species
Solyc03g112710.1.1	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.03	OrthoFinder output from all 47 species
Solyc11g008230.1.1	ASK11, SK11,...	target protein binding component SKP1/ASK1 of...	0.03	OrthoFinder output from all 47 species
Solyc11g008240.1.1	ASK11, SK11,...	target protein binding component SKP1/ASK1 of...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004044	amidophosphoribosyltransferase activity	IEP	HCCA
BP	GO:0006144	purine nucleobase metabolic process	IEP	HCCA
BP	GO:0009112	nucleobase metabolic process	IEP	HCCA
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
BP	GO:0046112	nucleobase biosynthetic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016072	Skp1_comp_dimer	141	187
IPR016073	Skp1_comp_POZ	4	63

External Links

No external refs found!