AT2G02820 (MYB88, AtMYB88)

Aliases : MYB88, AtMYB88

Description : myb domain protein 88

Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G02820

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00208260	MYB3R-3,...	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
AT1G73410	MYB54, ATMYB54	myb domain protein 54	0.03	OrthoFinder output from all 47 species
Adi_g020716	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Cre01.g034350	PGA37, ATMYB118, MYB118	RNA biosynthesis.transcriptional activation.MYB...	0.01	OrthoFinder output from all 47 species
Cre03.g197100	ATMYB119, MYB119	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
Lfl_g10864	MYB54, ATMYB54	MYB class-R2R3 subgroup-21 transcription factor &...	0.04	OrthoFinder output from all 47 species
Lfl_g25897	MYB77	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Msp_g11561	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Pp3c17_19947V3.1	AtMYB124,...	myb domain protein 88	0.01	OrthoFinder output from all 47 species
Pp3c17_19960V3.1	Pp3c17_19960	No annotation	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0226.g026344	MYB70, AtMYB70	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.04	OrthoFinder output from all 47 species
Solyc04g005710.3.1	AtMYB124,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Spa_g16917	ATMYB3R5, MYB3R-5	R1R2R3-MYB transcription factor & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010052	guard cell differentiation	IGI	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

External Links

No external refs found!

AT2G02820 (MYB88, AtMYB88)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation