Aliases : PLPB, PLPA, PLPC, PLP
Description : PAS/LOV protein B
Gene families : OG0002747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002747_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cba_g25737 | PLPB, PLPA, PLPC, PLP | UV-A/blue light photoreceptor *(PLP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.27G064400.1 | PLPB, PLPA,... | UV-A/blue light photoreceptor *(PLP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g22858 | PLPB, PLPA, PLPC, PLP | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g21360 | PLPB, PLPA, PLPC, PLP | UV-A/blue light photoreceptor *(PLP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Mp3g03660.1 | PLPB, PLPA, PLPC, PLP | PLP UV-A/blue light photoreceptor | 0.03 | OrthoFinder output from all 47 species | |
Msp_g09026 | PLPB, PLPA, PLPC, PLP | UV-A/blue light photoreceptor *(PLP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g30893 | PLPB, PLPA, PLPC, PLP | UV-A/blue light photoreceptor *(PLP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g25298 | No alias | UV-A/blue light photoreceptor *(PLP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g007020.4.1 | PLPB, PLPA,... | PLP UV-A/blue light photoreceptor | 0.03 | OrthoFinder output from all 47 species | |
Tin_g09118 | PLPB, PLPA, PLPC, PLP | UV-A/blue light photoreceptor *(PLP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e016621_P007 | PLPB, PLPA,... | PLP UV-A/blue light photoreceptor | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004871 | obsolete signal transducer activity | ISS | Interproscan |
CC | GO:0005886 | plasma membrane | ISM | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | ISS | Interproscan |
BP | GO:0007165 | signal transduction | ISS | Interproscan |
BP | GO:0010155 | regulation of proton transport | RCA | Interproscan |
BP | GO:0046777 | protein autophosphorylation | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0001101 | response to acid chemical | IEP | HCCA |
MF | GO:0003727 | single-stranded RNA binding | IEP | HCCA |
MF | GO:0004177 | aminopeptidase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
BP | GO:0006301 | postreplication repair | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006487 | protein N-linked glycosylation | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006625 | protein targeting to peroxisome | IEP | HCCA |
BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
BP | GO:0006664 | glycolipid metabolic process | IEP | HCCA |
BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0007031 | peroxisome organization | IEP | HCCA |
BP | GO:0007154 | cell communication | IEP | HCCA |
MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
BP | GO:0008284 | positive regulation of cell population proliferation | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | HCCA |
BP | GO:0009267 | cellular response to starvation | IEP | HCCA |
BP | GO:0009410 | response to xenobiotic stimulus | IEP | HCCA |
BP | GO:0009414 | response to water deprivation | IEP | HCCA |
BP | GO:0009415 | response to water | IEP | HCCA |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0009914 | hormone transport | IEP | HCCA |
BP | GO:0009926 | auxin polar transport | IEP | HCCA |
BP | GO:0009991 | response to extracellular stimulus | IEP | HCCA |
MF | GO:0010013 | N-1-naphthylphthalamic acid binding | IEP | HCCA |
BP | GO:0010311 | lateral root formation | IEP | HCCA |
BP | GO:0010351 | lithium ion transport | IEP | HCCA |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | HCCA |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0015919 | peroxisomal membrane transport | IEP | HCCA |
BP | GO:0016036 | cellular response to phosphate starvation | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016558 | protein import into peroxisome matrix | IEP | HCCA |
CC | GO:0019005 | SCF ubiquitin ligase complex | IEP | HCCA |
BP | GO:0019374 | galactolipid metabolic process | IEP | HCCA |
BP | GO:0019375 | galactolipid biosynthetic process | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0030163 | protein catabolic process | IEP | HCCA |
BP | GO:0030422 | siRNA processing | IEP | HCCA |
BP | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0031406 | carboxylic acid binding | IEP | HCCA |
BP | GO:0031667 | response to nutrient levels | IEP | HCCA |
BP | GO:0031668 | cellular response to extracellular stimulus | IEP | HCCA |
BP | GO:0031669 | cellular response to nutrient levels | IEP | HCCA |
BP | GO:0032870 | cellular response to hormone stimulus | IEP | HCCA |
MF | GO:0033218 | amide binding | IEP | HCCA |
MF | GO:0033293 | monocarboxylic acid binding | IEP | HCCA |
BP | GO:0035196 | miRNA processing | IEP | HCCA |
BP | GO:0042127 | regulation of cell population proliferation | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
BP | GO:0042594 | response to starvation | IEP | HCCA |
BP | GO:0042631 | cellular response to water deprivation | IEP | HCCA |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | HCCA |
MF | GO:0043177 | organic acid binding | IEP | HCCA |
BP | GO:0043574 | peroxisomal transport | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0043687 | post-translational protein modification | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | HCCA |
BP | GO:0045892 | negative regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | HCCA |
CC | GO:0048471 | perinuclear region of cytoplasm | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051302 | regulation of cell division | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0051781 | positive regulation of cell division | IEP | HCCA |
BP | GO:0060918 | auxin transport | IEP | HCCA |
BP | GO:0065002 | intracellular protein transmembrane transport | IEP | HCCA |
BP | GO:0070887 | cellular response to chemical stimulus | IEP | HCCA |
BP | GO:0071214 | cellular response to abiotic stimulus | IEP | HCCA |
BP | GO:0071229 | cellular response to acid chemical | IEP | HCCA |
BP | GO:0071310 | cellular response to organic substance | IEP | HCCA |
BP | GO:0071365 | cellular response to auxin stimulus | IEP | HCCA |
BP | GO:0071462 | cellular response to water stimulus | IEP | HCCA |
BP | GO:0071495 | cellular response to endogenous stimulus | IEP | HCCA |
BP | GO:0071496 | cellular response to external stimulus | IEP | HCCA |
BP | GO:0071806 | protein transmembrane transport | IEP | HCCA |
BP | GO:0072662 | protein localization to peroxisome | IEP | HCCA |
BP | GO:0072663 | establishment of protein localization to peroxisome | IEP | HCCA |
BP | GO:0080129 | proteasome core complex assembly | IEP | HCCA |
BP | GO:0104004 | cellular response to environmental stimulus | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901701 | cellular response to oxygen-containing compound | IEP | HCCA |
BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:1903509 | liposaccharide metabolic process | IEP | HCCA |
No external refs found! |