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  5. AT2G02100

AT2G02100 (LCR69, PDF2.2)


Aliases : LCR69, PDF2.2

Description : low-molecular-weight cysteine-rich 69


Gene families : OG0007968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G02100
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT1G61070 PDF2.4, LCR66 low-molecular-weight cysteine-rich 66 0.05 OrthoFinder output from all 47 species
AT2G02120 PDF2.1, LCR70 Scorpion toxin-like knottin superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G02147 LCR73 low-molecular-weight cysteine-rich 73 0.05 OrthoFinder output from all 47 species
AT2G31953 LCR76 low-molecular-weight cysteine-rich 76 0.04 OrthoFinder output from all 47 species
AT2G31957 LCR75, LCR79 low-molecular-weight cysteine-rich 75 0.01 OrthoFinder output from all 47 species
AT5G63660 LCR74, PDF2.5 Scorpion toxin-like knottin superfamily protein 0.04 OrthoFinder output from all 47 species
GSVIVT01036750001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_21854 No alias defensin (PDF2) 0.03 OrthoFinder output from all 47 species
LOC_Os01g70680.1 LOC_Os01g70680 defensin (PDF2) 0.04 OrthoFinder output from all 47 species
LOC_Os03g03810.1 LOC_Os03g03810 defensin (PDF2) 0.03 OrthoFinder output from all 47 species
LOC_Os04g11130.1 LOC_Os04g11130 defensin (PDF2) 0.03 OrthoFinder output from all 47 species
LOC_Os04g11195.1 LOC_Os04g11195 defensin (PDF2) 0.03 OrthoFinder output from all 47 species
LOC_Os04g44130.1 LOC_Os04g44130 defensin (PDF2) 0.06 OrthoFinder output from all 47 species
MA_1489g0010 PDF2.1, LCR70 defensin (PDF1). defensin (PDF2) 0.03 OrthoFinder output from all 47 species
Solyc04g008470.3.1 PDF2.3, LCR68,... defensin (PDF2) 0.04 OrthoFinder output from all 47 species
Solyc07g007730.4.1 LCR69, PDF2.2,... defensin (PDF2) 0.04 OrthoFinder output from all 47 species
Solyc07g007740.1.1 Solyc07g007740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g007755.1.1 PDF2.3, LCR68,... defensin (PDF2) 0.01 OrthoFinder output from all 47 species
Solyc11g006260.2.1 LCR74, PDF2.5,... defensin (PDF2) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006952 defense response ISS Interproscan
CC GO:0009505 plant-type cell wall IDA Interproscan
MF GO:0030414 peptidase inhibitor activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000248 C-5 sterol desaturase activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006722 triterpenoid metabolic process IEP HCCA
BP GO:0010052 guard cell differentiation IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP HCCA
BP GO:0016104 triterpenoid biosynthetic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP HCCA
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP HCCA
BP GO:0032881 regulation of polysaccharide metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0070704 sterol desaturase activity IEP HCCA
BP GO:0090691 formation of plant organ boundary IEP HCCA
BP GO:1902066 regulation of cell wall pectin metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!