AT1G78240 (OSU1, QUA2, TSD2)

Aliases : OSU1, QUA2, TSD2

Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Gene families : OG0002602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002602_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G78240
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
Adi_g110589	OSU1, QUA2, TSD2	pectin methyltransferase *(QUA2) involved in...	0.04	OrthoFinder output from all 47 species
Aev_g06693	OSU1, QUA2, TSD2	pectin methyltransferase *(QUA2) involved in...	0.02	OrthoFinder output from all 47 species
Aev_g28759	OSU1, QUA2, TSD2	pectin methyltransferase *(QUA2) involved in...	0.02	OrthoFinder output from all 47 species
Ala_g06252	QUL1	pectin methyltransferase *(QUA2) involved in...	0.03	OrthoFinder output from all 47 species
Als_g40211	OSU1, QUA2, TSD2	pectin methyltransferase *(QUA2) involved in...	0.03	OrthoFinder output from all 47 species
Aob_g20907	QUL1	pectin methyltransferase *(QUA2) involved in...	0.02	OrthoFinder output from all 47 species
Aob_g33833	OSU1, QUA2, TSD2	pectin methyltransferase *(QUA2) involved in...	0.03	OrthoFinder output from all 47 species
Aop_g29423	QUL2	pectin methyltransferase *(QUA2) involved in...	0.03	OrthoFinder output from all 47 species
Cba_g24542	OSU1, QUA2, TSD2	pectin methyltransferase *(QUA2) involved in...	0.03	OrthoFinder output from all 47 species
Ceric.18G036700.1	OSU1, QUA2,...	pectin methyltransferase *(QUA2) involved in...	0.04	OrthoFinder output from all 47 species
Dac_g07135	OSU1, QUA2, TSD2	pectin methyltransferase *(QUA2) involved in...	0.03	OrthoFinder output from all 47 species
Dcu_g01897	OSU1, QUA2, TSD2	pectin methyltransferase *(QUA2) involved in...	0.02	OrthoFinder output from all 47 species
Ehy_g08663	OSU1, QUA2, TSD2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g21116	OSU1, QUA2, TSD2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os02g51860.1	OSU1, QUA2,...	Probable pectin methyltransferase QUA2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Len_g19714	OSU1, QUA2, TSD2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g09766	OSU1, QUA2, TSD2	pectin methyltransferase *(QUA2) involved in...	0.04	OrthoFinder output from all 47 species
MA_10431583g0020	QUL2	Probable methyltransferase PMT4 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Ppi_g52487	OSU1, QUA2, TSD2	pectin methyltransferase *(QUA2) involved in...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009268	OSU1, QUA2, TSD2	not classified & original description: CDS=863-2755	0.05	OrthoFinder output from all 47 species
Smo426562	OSU1, QUA2, TSD2	Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Spa_g16410	QUL2	pectin methyltransferase *(QUA2) involved in...	0.02	OrthoFinder output from all 47 species
Tin_g14269	OSU1, QUA2, TSD2	pecTin methyltransferase *(QUA2) involved in...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	ISM	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IMP	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010289	homogalacturonan biosynthetic process	IMP	Interproscan
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010393	galacturonan metabolic process	None	Extended
BP	GO:0010394	homogalacturonan metabolic process	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045488	pectin metabolic process	None	Extended
BP	GO:0045489	pectin biosynthetic process	None	Extended
BP	GO:0048364	root development	IMP	Interproscan
BP	GO:0048367	shoot system development	IMP	Interproscan
BP	GO:0048731	system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0052325	cell wall pectin biosynthetic process	None	Extended
BP	GO:0052546	cell wall pectin metabolic process	None	Extended
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000325	plant-type vacuole	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005245	voltage-gated calcium channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
MF	GO:0005262	calcium channel activity	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006007	glucose catabolic process	IEP	HCCA
BP	GO:0006816	calcium ion transport	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
BP	GO:0007033	vacuole organization	IEP	HCCA
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	HCCA
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	HCCA
BP	GO:0009556	microsporogenesis	IEP	HCCA
BP	GO:0009694	jasmonic acid metabolic process	IEP	HCCA
BP	GO:0009695	jasmonic acid biosynthetic process	IEP	HCCA
BP	GO:0009845	seed germination	IEP	HCCA
BP	GO:0010119	regulation of stomatal movement	IEP	HCCA
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	HCCA
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016165	linoleate 13S-lipoxygenase activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019216	regulation of lipid metabolic process	IEP	HCCA
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	HCCA
BP	GO:0019320	hexose catabolic process	IEP	HCCA
BP	GO:0019722	calcium-mediated signaling	IEP	HCCA
BP	GO:0019932	second-messenger-mediated signaling	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022832	voltage-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0022843	voltage-gated monoatomic cation channel activity	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
BP	GO:0033037	polysaccharide localization	IEP	HCCA
BP	GO:0034293	sexual sporulation	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0042304	regulation of fatty acid biosynthetic process	IEP	HCCA
BP	GO:0043934	sporulation	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046365	monosaccharide catabolic process	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	HCCA
MF	GO:0048040	UDP-glucuronate decarboxylase activity	IEP	HCCA
BP	GO:0048236	plant-type sporogenesis	IEP	HCCA
BP	GO:0048767	root hair elongation	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0051321	meiotic cell cycle	IEP	HCCA
BP	GO:0052386	cell wall thickening	IEP	HCCA
BP	GO:0052543	callose deposition in cell wall	IEP	HCCA
BP	GO:0052545	callose localization	IEP	HCCA
BP	GO:0062012	regulation of small molecule metabolic process	IEP	HCCA
BP	GO:0080140	regulation of jasmonic acid metabolic process	IEP	HCCA
BP	GO:0080141	regulation of jasmonic acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004159	Put_SAM_MeTrfase	155	676

External Links

No external refs found!

AT1G78240 (OSU1, QUA2, TSD2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation