1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G77860

AT1G77860 (KOM)


Aliases : KOM

Description : Rhomboid-related intramembrane serine protease family protein


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G77860
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00044730 RBL1, ATRBL1,... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AT1G63120 RBL2, ATRBL2 RHOMBOID-like 2 0.04 OrthoFinder output from all 47 species
Ala_g01683 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28631.t1 RBL1, ATRBL1,... protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008957001 KOM Protein degradation.peptidase families.serine-type... 0.08 OrthoFinder output from all 47 species
GSVIVT01017301001 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os08g43320.1 RBL2, ATRBL2,... protease (RBL) 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010272 RBL1, ATRBL1 protease *(RBL) & original description: CDS=374-1408 0.03 OrthoFinder output from all 47 species
Smo84059 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Solyc11g013320.2.1 KOM, Solyc11g013320 protease (RBL) 0.1 OrthoFinder output from all 47 species
Zm00001e010203_P002 RBL2, ATRBL2,... protease (RBL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048654 anther morphogenesis IEP HCCA
BP GO:0048658 anther wall tapetum development IEP HCCA
BP GO:0055046 microgametogenesis IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 118 256
No external refs found!