AT1G76280


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0007936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007936_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G76280
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Aop_g05250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
MF GO:0015562 efflux transmembrane transporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0050829 defense response to Gram-negative bacterium IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 617 671
IPR002885 Pentatricopeptide_repeat 405 450
IPR002885 Pentatricopeptide_repeat 527 570
No external refs found!