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AT1G76130 (AMY2, ATAMY2)


Aliases : AMY2, ATAMY2

Description : alpha-amylase-like 2


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G76130
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00183740 AMY2, ATAMY2,... Carbohydrate metabolism.starch... 0.04 OrthoFinder output from all 47 species
Aspi01Gene38425.t1 AMY2, ATAMY2,... alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52324.t1 AMY1, ATAMY1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22213 AMY1, ATAMY1 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_04801 AMY2, ATAMY2 alpha amylase 0.03 OrthoFinder output from all 47 species
MA_9120657g0010 AMY2, ATAMY2 Probable alpha-amylase 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005576 extracellular region TAS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0010039 response to iron ion IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010088 phloem development IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055072 iron ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 356 412
IPR006047 Glyco_hydro_13_cat_dom 48 114
No external refs found!