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  5. AT1G75960

AT1G75960


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG0000597 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000597_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G75960
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Adi_g009659 AAE1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020846 ACN1, AAE7 peroxisomal acetyl-CoA synthetase *(ACN/BZU) & original... 0.02 OrthoFinder output from all 47 species
Aev_g12970 ACN1, AAE7 peroxisomal acetyl-CoA synthetase *(ACN/BZU) & original... 0.02 OrthoFinder output from all 47 species
Als_g33253 ACN1, AAE7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01843 ACN1, AAE7 peroxisomal acetyl-CoA synthetase *(ACN/BZU) & original... 0.02 OrthoFinder output from all 47 species
Aop_g21979 ACN1, AAE7 peroxisomal acetyl-CoA synthetase *(ACN/BZU) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22852.t1 AAE1, Aspi01Gene22852 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G076200.1 AAE1, Ceric.18G076200 not classified & original description: pacid=50621480... 0.03 OrthoFinder output from all 47 species
Dcu_g08784 ACN1, AAE7 peroxisomal acetyl-CoA synthetase *(ACN/BZU) & original... 0.02 OrthoFinder output from all 47 species
Dde_g20921 ACN1, AAE7 peroxisomal acetyl-CoA synthetase *(ACN/BZU) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04803 ACN1, AAE7 peroxisomal acetyl-CoA synthetase *(ACN/BZU) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01003829001 No alias Probable acyl-activating enzyme 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01003832001 No alias Probable acyl-activating enzyme 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g24030.1 AAE1, LOC_Os01g24030 Probable acyl-activating enzyme 1, peroxisomal... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04120.1 AAE1, LOC_Os03g04120 Probable acyl-activating enzyme 1, peroxisomal... 0.03 OrthoFinder output from all 47 species
LOC_Os03g19250.1 ACN1, AAE7,... Acetate/butyrate--CoA ligase AAE7, peroxisomal... 0.03 OrthoFinder output from all 47 species
Len_g01311 ACN1, AAE7 peroxisomal acetyl-CoA synthetase *(ACN/BZU) & original... 0.02 OrthoFinder output from all 47 species
MA_123970g0010 AAE5 Probable acyl-activating enzyme 5, peroxisomal... 0.02 OrthoFinder output from all 47 species
Smo421195 ACN1, AAE7 Acetate/butyrate--CoA ligase AAE7, peroxisomal... 0.01 OrthoFinder output from all 47 species
Solyc12g099360.2.1 ACN1, AAE7,... Acetate/butyrate--CoA ligase AAE7, peroxisomal... 0.03 OrthoFinder output from all 47 species
Tin_g01974 ACN1, AAE7 peroxisomal acetyl-CoA synthetase *(ACN/BZU) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e030943_P001 AAE5, Zm00001e030943 Probable acyl-activating enzyme 5, peroxisomal... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000419 RNA polymerase V complex IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
BP GO:0000719 photoreactive repair IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004360 glutamine-fructose-6-phosphate transaminase (isomerizing) activity IEP HCCA
MF GO:0004610 phosphoacetylglucosamine mutase activity IEP HCCA
MF GO:0004614 phosphoglucomutase activity IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006041 glucosamine metabolic process IEP HCCA
BP GO:0006042 glucosamine biosynthetic process IEP HCCA
BP GO:0006047 UDP-N-acetylglucosamine metabolic process IEP HCCA
BP GO:0006048 UDP-N-acetylglucosamine biosynthetic process IEP HCCA
BP GO:0006290 pyrimidine dimer repair IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019255 glucose 1-phosphate metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046349 amino sugar biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0070548 L-glutamine aminotransferase activity IEP HCCA
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901073 glucosamine-containing compound biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 454 531
IPR000873 AMP-dep_Synth/Lig_com 21 445
No external refs found!