Aliases : JAC1
Description : J-domain protein required for chloroplast accumulation response 1
Gene families : OG0000516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000516_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00059p00139560 | JAC1,... | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.04 | OrthoFinder output from all 47 species | |
Adi_g109494 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g13965 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g17543 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene50602.t1 | Aspi01Gene50602 | clathrin uncoating protein *(AUL) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene52094.t1 | Aspi01Gene52094 | clathrin uncoating protein *(AUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene52095.t2 | Aspi01Gene52095 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0330.g065367 | No alias | clathrin uncoating protein *(AUL) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g25925 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ceric.03G078100.1 | Ceric.03G078100 | clathrin uncoating protein *(AUL) & original... | 0.13 | OrthoFinder output from all 47 species | |
Ceric.30G034000.1 | Ceric.30G034000 | clathrin uncoating protein *(AUL) & original... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01009663001 | JAC1 | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.11 | OrthoFinder output from all 47 species | |
GSVIVT01021545001 | No alias | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g10180.1 | JAC1, LOC_Os03g10180 | actin filament reorganisation factor (JAC1). clathrin... | 0.09 | OrthoFinder output from all 47 species | |
Mp3g09960.1 | No alias | clathrin uncoating protein (AUL) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g14948 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g39833 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g12996 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g22188 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g59853 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g12623 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo447002 | No alias | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.11 | OrthoFinder output from all 47 species | |
Solyc04g080040.3.1 | JAC1, Solyc04g080040 | actin filament reorganisation factor (JAC1). clathrin... | 0.1 | OrthoFinder output from all 47 species | |
Tin_g28933 | No alias | clathrin uncoaTing protein *(AUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e038789_P003 | JAC1, Zm00001e038789 | actin filament reorganisation factor (JAC1). clathrin... | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005737 | cytoplasm | IDA | Interproscan |
BP | GO:0007015 | actin filament organization | IMP | Interproscan |
CC | GO:0009507 | chloroplast | ISM | Interproscan |
BP | GO:0009903 | chloroplast avoidance movement | IMP | Interproscan |
BP | GO:0009904 | chloroplast accumulation movement | IMP | Interproscan |
BP | GO:0071483 | cellular response to blue light | IMP | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
CC | GO:0005884 | actin filament | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006473 | protein acetylation | IEP | HCCA |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0006783 | heme biosynthetic process | IEP | HCCA |
BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006970 | response to osmotic stress | IEP | HCCA |
BP | GO:0007623 | circadian rhythm | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008883 | glutamyl-tRNA reductase activity | IEP | HCCA |
CC | GO:0009526 | plastid envelope | IEP | HCCA |
CC | GO:0009528 | plastid inner membrane | IEP | HCCA |
CC | GO:0009532 | plastid stroma | IEP | HCCA |
CC | GO:0009570 | chloroplast stroma | IEP | HCCA |
BP | GO:0009648 | photoperiodism | IEP | HCCA |
BP | GO:0009651 | response to salt stress | IEP | HCCA |
CC | GO:0009706 | chloroplast inner membrane | IEP | HCCA |
BP | GO:0009723 | response to ethylene | IEP | HCCA |
BP | GO:0009733 | response to auxin | IEP | HCCA |
BP | GO:0009737 | response to abscisic acid | IEP | HCCA |
BP | GO:0009739 | response to gibberellin | IEP | HCCA |
BP | GO:0009751 | response to salicylic acid | IEP | HCCA |
BP | GO:0009753 | response to jasmonic acid | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009909 | regulation of flower development | IEP | HCCA |
CC | GO:0009941 | chloroplast envelope | IEP | HCCA |
BP | GO:0010038 | response to metal ion | IEP | HCCA |
BP | GO:0010039 | response to iron ion | IEP | HCCA |
BP | GO:0010099 | regulation of photomorphogenesis | IEP | HCCA |
BP | GO:0010100 | negative regulation of photomorphogenesis | IEP | HCCA |
BP | GO:0010109 | regulation of photosynthesis | IEP | HCCA |
BP | GO:0010155 | regulation of proton transport | IEP | HCCA |
MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | HCCA |
BP | GO:0010304 | PSII associated light-harvesting complex II catabolic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0014070 | response to organic cyclic compound | IEP | HCCA |
BP | GO:0015994 | chlorophyll metabolic process | IEP | HCCA |
BP | GO:0015995 | chlorophyll biosynthetic process | IEP | HCCA |
BP | GO:0015996 | chlorophyll catabolic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
BP | GO:0016573 | histone acetylation | IEP | HCCA |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
MF | GO:0016987 | sigma factor activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
CC | GO:0031967 | organelle envelope | IEP | HCCA |
CC | GO:0031969 | chloroplast membrane | IEP | HCCA |
CC | GO:0031975 | envelope | IEP | HCCA |
BP | GO:0032922 | circadian regulation of gene expression | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0033015 | tetrapyrrole catabolic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0042168 | heme metabolic process | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | HCCA |
BP | GO:0042752 | regulation of circadian rhythm | IEP | HCCA |
BP | GO:0042754 | negative regulation of circadian rhythm | IEP | HCCA |
BP | GO:0043433 | negative regulation of DNA-binding transcription factor activity | IEP | HCCA |
BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0043966 | histone H3 acetylation | IEP | HCCA |
BP | GO:0044092 | negative regulation of molecular function | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0046148 | pigment biosynthetic process | IEP | HCCA |
BP | GO:0046149 | pigment catabolic process | IEP | HCCA |
MF | GO:0046429 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046677 | response to antibiotic | IEP | HCCA |
BP | GO:0046686 | response to cadmium ion | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048511 | rhythmic process | IEP | HCCA |
BP | GO:0048571 | long-day photoperiodism | IEP | HCCA |
BP | GO:0048573 | photoperiodism, flowering | IEP | HCCA |
BP | GO:0048574 | long-day photoperiodism, flowering | IEP | HCCA |
BP | GO:0048580 | regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048653 | anther development | IEP | HCCA |
BP | GO:0048831 | regulation of shoot system development | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051017 | actin filament bundle assembly | IEP | HCCA |
BP | GO:0051090 | regulation of DNA-binding transcription factor activity | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051239 | regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | HCCA |
BP | GO:0051775 | response to redox state | IEP | HCCA |
MF | GO:0052592 | oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor | IEP | HCCA |
BP | GO:0055072 | iron ion homeostasis | IEP | HCCA |
BP | GO:0055076 | transition metal ion homeostasis | IEP | HCCA |
BP | GO:0061572 | actin filament bundle organization | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0070542 | response to fatty acid | IEP | HCCA |
BP | GO:0071461 | cellular response to redox state | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0080005 | photosystem stoichiometry adjustment | IEP | HCCA |
BP | GO:0097305 | response to alcohol | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
CC | GO:0099080 | supramolecular complex | IEP | HCCA |
CC | GO:0099081 | supramolecular polymer | IEP | HCCA |
CC | GO:0099512 | supramolecular fiber | IEP | HCCA |
CC | GO:0099513 | polymeric cytoskeletal fiber | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901700 | response to oxygen-containing compound | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2000026 | regulation of multicellular organismal development | IEP | HCCA |
BP | GO:2000030 | regulation of response to red or far red light | IEP | HCCA |
BP | GO:2000241 | regulation of reproductive process | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |