1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G72850

AT1G72850


Description : Disease resistance protein (TIR-NBS class)


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G72850

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00233110 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AT5G41540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Ala_g32513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g12103 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60152.t1 Aspi01Gene60152 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51801 LAZ5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27274 LAZ5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036405001 No alias External stimuli response.biotic stress.pathogen... 0.01 OrthoFinder output from all 47 species
Gb_11526 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
Gb_17905 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
Gb_21493 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
Gb_23544 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_33283 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10097127g0010 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
MA_10433003g0040 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_12346g0030 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
MA_4576769g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Pir_g30935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39827 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g46217 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50105 No alias effector receptor *(NLR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g052780.3.1 Solyc07g052780 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006952 defense response ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006278 RNA-templated DNA biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0009687 abscisic acid metabolic process IEP HCCA
BP GO:0009688 abscisic acid biosynthetic process IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
BP GO:0010080 regulation of floral meristem growth IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0035265 organ growth IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0043288 apocarotenoid metabolic process IEP HCCA
BP GO:0043289 apocarotenoid biosynthetic process IEP HCCA
BP GO:0045003 double-strand break repair via synthesis-dependent strand annealing IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0060771 phyllotactic patterning IEP HCCA
BP GO:0060772 leaf phyllotactic patterning IEP HCCA
BP GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902644 tertiary alcohol metabolic process IEP HCCA
BP GO:1902645 tertiary alcohol biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 177 400
IPR000157 TIR_dom 6 166
No external refs found!