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  5. AT1G72670

AT1G72670 (iqd8)


Aliases : iqd8

Description : IQ-domain 8


Gene families : OG0001294 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001294_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G72670
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00027450 IQD6,... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.13 OrthoFinder output from all 47 species
Als_g11971 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18384 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00647 IQD6 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aspi01Gene15912.t1 IQD6, Aspi01Gene15912 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0027.g023688 IQD6 not classified & original description: CDS=350-1708 0.07 OrthoFinder output from all 47 species
Ceric.09G101400.1 IQD6, Ceric.09G101400 not classified & original description: pacid=50587571... 0.1 OrthoFinder output from all 47 species
Dac_g00730 IQD6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g31746 IQD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035382001 IQD6 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.18 OrthoFinder output from all 47 species
Gb_01817 IQD6 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
LOC_Os01g09790.1 IQD6, LOC_Os01g09790 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os01g51230.1 IQD6, LOC_Os01g51230 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g04210.1 IQD20, LOC_Os03g04210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g57330.1 IQD5, LOC_Os03g57330 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g42430.1 IQD5, LOC_Os12g42430 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g04277 IQD6 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Mp5g20460.1 IQD6 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g11509 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32341 IQD6 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g24119 IQD6 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ppi_g02071 IQD5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14460 IQD6 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021834 IQD6 not classified & original description: CDS=1-1233 0.05 OrthoFinder output from all 47 species
Sam_g25102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g121760.3.1 iqd8, Solyc03g121760 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Solyc08g062940.4.1 IQD6, Solyc08g062940 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.16 OrthoFinder output from all 47 species
Spa_g50617 IQD6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05096 IQD6 not classified & original description: none 0.15 OrthoFinder output from all 47 species
Zm00001e016563_P001 IQD6, Zm00001e016563 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Zm00001e020006_P001 IQD6, Zm00001e020006 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e032277_P001 IQD6, Zm00001e032277 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
MF GO:0005516 calmodulin binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006268 DNA unwinding involved in DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 94 113
IPR000048 IQ_motif_EF-hand-BS 116 133
No external refs found!