AT1G71320

Description : F-box family protein

Gene families : OG0011367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011367_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G71320
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AT1G12855	No alias	F-box family protein	0.03	OrthoFinder output from all 47 species
AT1G12870	No alias	F-box and associated interaction domains-containing protein	0.01	OrthoFinder output from all 47 species
AT1G33530	No alias	F-box family protein	0.06	OrthoFinder output from all 47 species
AT2G34280	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from all 47 species
AT3G62380	No alias	CONTAINS InterPro DOMAIN/s: F-box associated interaction...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000311	plastid large ribosomal subunit	IEP	HCCA
CC	GO:0000315	organellar large ribosomal subunit	IEP	HCCA
MF	GO:0003883	CTP synthase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006527	F-box-assoc_dom_typ1	249	342

External Links

No external refs found!