AT1G68550

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G68550

Target	Alias	Description	ECC score	Gene Family Method
AT3G23240	ERF1, ATERF1	ethylene response factor 1	0.05	OrthoFinder output from all 47 species
Als_g08964	No alias	subgroup ERF-V transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene17089.t1	Aspi01Gene17089	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene29677.t1	PUCHI, Aspi01Gene29677	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene49926.t1	ATERF12, ERF12,...	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene71427.t1	CRF3, Aspi01Gene71427	subgroup ERF-VI transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0045.g029941	No alias	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0263.g060857	LEP	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dcu_g23766	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g42203	No alias	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g42465	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g45380	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g00959	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Ehy_g08401	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g11677	No alias	subgroup ERF-V transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Gb_00745	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Gb_08781	ABI4, SAN5,...	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Gb_25978	ABI4, SAN5,...	Ethylene-responsive transcription factor ABI4...	0.04	OrthoFinder output from all 47 species
Gb_41294	No alias	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
LOC_Os09g20350.1	RAP2.4, LOC_Os09g20350	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Ore_g03908	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g28144	DDF1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g35430	ERF1, ATERF1	subgroup ERF-IX transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g10528	CRF4	subgroup ERF-VI transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g17524	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g00486	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004000	adenosine deaminase activity	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	HCCA
MF	GO:0019239	deaminase activity	IEP	HCCA
BP	GO:0065001	specification of axis polarity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	112	159

External Links

No external refs found!

AT1G68550

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation