AT1G68120 (BPC3, ATBPC3)

Aliases : BPC3, ATBPC3

Description : basic pentacysteine 3

Gene families : OG0000626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G68120

Target	Alias	Description	ECC score	Gene Family Method
Adi_g021101	BPC3, ATBPC3	BBR/BPC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.04G022500.1	BPC3, ATBPC3,...	BBR/BPC-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sam_g24767	No alias	BBR/BPC-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g54772	BPC3, ATBPC3	BBR/BPC-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IPI	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	IPI	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	RCA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IPI	Interproscan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031047	RNA-mediated gene silencing	None	Extended
BP	GO:0031048	RNA-mediated heterochromatin formation	RCA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031507	heterochromatin formation	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034968	histone lysine methylation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0040029	epigenetic regulation of gene expression	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045814	negative regulation of gene expression, epigenetic	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051567	histone H3-K9 methylation	RCA	Interproscan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061647	histone H3-K9 modification	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070828	heterochromatin organization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:0140718	facultative heterochromatin formation	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000741	karyogamy	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006997	nucleus organization	IEP	HCCA
BP	GO:0010197	polar nucleus fusion	IEP	HCCA
BP	GO:0010212	response to ionizing radiation	IEP	HCCA
BP	GO:0010332	response to gamma radiation	IEP	HCCA
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	HCCA
MF	GO:0019207	kinase regulator activity	IEP	HCCA
MF	GO:0019887	protein kinase regulator activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
BP	GO:0048284	organelle fusion	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010409	GAGA-bd_tscrpt_act	2	270

External Links

No external refs found!

AT1G68120 (BPC3, ATBPC3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation