Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0000329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000329_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT1G67910 | |
Cluster | HCCA: Cluster_22 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00016p00253230 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00033p00173430 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00049p00216010 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00061p00175960 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
AT5G11090 | No alias | serine-rich protein-related | 0.04 | OrthoFinder output from all 47 species | |
Adi_g044951 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g20522 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g21017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g36134 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g48875 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g33583 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g37100 | No alias | component *(MED19) of head module of MEDIATOR... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene49291.t1 | Aspi01Gene49291 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.06G073300.1 | Ceric.06G073300 | not classified & original description: pacid=50619460... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.29G029500.1 | Ceric.29G029500 | not classified & original description: pacid=50625444... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g40045 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g16430 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g29180 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01014741001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Gb_27597 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Gb_29842 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Gb_36288 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Gb_37466 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g32469.1 | LOC_Os02g32469 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g55600.1 | LOC_Os02g55600 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g55610.1 | LOC_Os02g55610 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Len_g11844 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g15751 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g06872 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g28775 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g35476 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_5883g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_9485570g0010 | No alias | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
Ore_g17393 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g20319 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g44065 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g07969 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g65153 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g08882 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g17598 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0021.g008383 | No alias | not classified & original description: CDS=1-396 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0064.g015803 | No alias | not classified & original description: CDS=1-222 | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | ND | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000139 | Golgi membrane | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0005496 | steroid binding | IEP | HCCA |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
MF | GO:0008142 | oxysterol binding | IEP | HCCA |
BP | GO:0008154 | actin polymerization or depolymerization | IEP | HCCA |
BP | GO:0009061 | anaerobic respiration | IEP | HCCA |
BP | GO:0009314 | response to radiation | IEP | HCCA |
BP | GO:0009416 | response to light stimulus | IEP | HCCA |
BP | GO:0009593 | detection of chemical stimulus | IEP | HCCA |
BP | GO:0009611 | response to wounding | IEP | HCCA |
BP | GO:0009646 | response to absence of light | IEP | HCCA |
BP | GO:0009698 | phenylpropanoid metabolic process | IEP | HCCA |
BP | GO:0009699 | phenylpropanoid biosynthetic process | IEP | HCCA |
BP | GO:0009704 | de-etiolation | IEP | HCCA |
BP | GO:0009720 | detection of hormone stimulus | IEP | HCCA |
BP | GO:0009723 | response to ethylene | IEP | HCCA |
BP | GO:0009726 | detection of endogenous stimulus | IEP | HCCA |
BP | GO:0009727 | detection of ethylene stimulus | IEP | HCCA |
MF | GO:0009815 | 1-aminocyclopropane-1-carboxylate oxidase activity | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010017 | red or far-red light signaling pathway | IEP | HCCA |
BP | GO:0010030 | positive regulation of seed germination | IEP | HCCA |
MF | GO:0010296 | prenylcysteine methylesterase activity | IEP | HCCA |
BP | GO:0010345 | suberin biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010500 | transmitting tissue development | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016630 | protochlorophyllide reductase activity | IEP | HCCA |
MF | GO:0016715 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0030041 | actin filament polymerization | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0031537 | regulation of anthocyanin metabolic process | IEP | HCCA |
BP | GO:0031539 | positive regulation of anthocyanin metabolic process | IEP | HCCA |
MF | GO:0032934 | sterol binding | IEP | HCCA |
BP | GO:0042991 | obsolete transcription factor import into nucleus | IEP | HCCA |
BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | HCCA |
BP | GO:0048438 | floral whorl development | IEP | HCCA |
BP | GO:0048445 | carpel morphogenesis | IEP | HCCA |
BP | GO:0048449 | floral organ formation | IEP | HCCA |
BP | GO:0048462 | carpel formation | IEP | HCCA |
BP | GO:0048467 | gynoecium development | IEP | HCCA |
BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | HCCA |
MF | GO:0050062 | long-chain-fatty-acyl-CoA reductase activity | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051258 | protein polymerization | IEP | HCCA |
MF | GO:0051723 | protein methylesterase activity | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0071241 | cellular response to inorganic substance | IEP | HCCA |
BP | GO:0071248 | cellular response to metal ion | IEP | HCCA |
BP | GO:0071281 | cellular response to iron ion | IEP | HCCA |
BP | GO:0071396 | cellular response to lipid | IEP | HCCA |
BP | GO:0071398 | cellular response to fatty acid | IEP | HCCA |
BP | GO:0071489 | cellular response to red or far red light | IEP | HCCA |
BP | GO:0071731 | response to nitric oxide | IEP | HCCA |
BP | GO:0071732 | cellular response to nitric oxide | IEP | HCCA |
MF | GO:0080019 | fatty-acyl-CoA reductase (alcohol-forming) activity | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:0080126 | ovary septum development | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
BP | GO:1901699 | cellular response to nitrogen compound | IEP | HCCA |
BP | GO:1902170 | cellular response to reactive nitrogen species | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:1905328 | plant septum development | IEP | HCCA |
BP | GO:1905393 | plant organ formation | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |