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  5. AT1G66320

AT1G66320


Description : F-box/RNI-like superfamily protein


Gene families : OG0007014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G66320
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT1G16940 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G22660 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.05 OrthoFinder output from all 47 species
AT5G22680 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from all 47 species
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0003002 regionalization IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006935 chemotaxis IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009830 cell wall modification involved in abscission IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
BP GO:0010183 pollen tube guidance IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
MF GO:0016405 CoA-ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016878 acid-thiol ligase activity IEP HCCA
MF GO:0018858 benzoate-CoA ligase activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0040011 locomotion IEP HCCA
BP GO:0040019 positive regulation of embryonic development IEP HCCA
BP GO:0042330 taxis IEP HCCA
BP GO:0044277 cell wall disassembly IEP HCCA
BP GO:0045995 regulation of embryonic development IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048479 style development IEP HCCA
BP GO:0048480 stigma development IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0050918 positive chemotaxis IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0060771 phyllotactic patterning IEP HCCA
BP GO:0060772 leaf phyllotactic patterning IEP HCCA
BP GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 34 67
IPR013101 Leu-rich_rpt_2 178 201
IPR006566 FBD 385 426
No external refs found!