Aliases : ATGSR2, GLN1;2, GSR2
Description : glutamine synthase clone F11
Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT1G66200 | |
Cluster | HCCA: Cluster_84 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00006p00241880 | ATGSR1, GLN1;1,... | Nutrient uptake.nitrogen assimilation.ammonium... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00025p00120730 | GS2, ATGSL1,... | Nutrient uptake.nitrogen assimilation.ammonium... | 0.04 | OrthoFinder output from all 47 species | |
Als_g44837 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene56798.t1 | GLN1;4, Aspi01Gene56798 | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g37834 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.20G000200.1 | GLN1;4, Ceric.20G000200 | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.39G059200.1 | GLN1;4, Ceric.39G059200 | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01011072001 | GS2, ATGSL1, GLN2 | Nutrient uptake.nitrogen assimilation.ammonium... | 0.02 | OrthoFinder output from all 47 species | |
Gb_00897 | ATGSR1, GLN1;1,... | Glutamine synthetase root isozyme 3 OS=Zea mays... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g50240.1 | ATGSR1, GLN1;1,... | cytosolic glutamine synthetase (GLN1) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g50490.1 | ATGSR1, GLN1;1,... | cytosolic glutamine synthetase (GLN1) | 0.02 | OrthoFinder output from all 47 species | |
MA_39847g0010 | GLN1.3, ATGSKB6, GLN1;3 | cytosolic glutamine synthetase (GLN1) | 0.02 | OrthoFinder output from all 47 species | |
Mp1g03980.1 | ATGSR1, GLN1;1,... | cytosolic glutamine synthetase (GLN1) | 0.02 | OrthoFinder output from all 47 species | |
Mp5g13580.1 | ATGSR1, GLN1;1,... | cytosolic glutamine synthetase (GLN1) | 0.03 | OrthoFinder output from all 47 species | |
Mp6g06750.1 | GLN1;4 | cytosolic glutamine synthetase (GLN1) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g33326 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g34282 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g05089 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g61508 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g16445 | No alias | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g16713 | No alias | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g19068 | No alias | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g014510.3.1 | ATGSR1, GLN1;1,... | cytosolic glutamine synthetase (GLN1) | 0.11 | OrthoFinder output from all 47 species | |
Spa_g39138 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e000880_P002 | ATGSR1, GLN1;1,... | Glutamine synthetase root isozyme 1 OS=Zea mays... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e005453_P003 | ATGSR1, GLN1;1,... | cytosolic glutamine synthetase (GLN1) | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004356 | glutamate-ammonia ligase activity | IDA | Interproscan |
MF | GO:0004356 | glutamate-ammonia ligase activity | ISS | Interproscan |
MF | GO:0005507 | copper ion binding | IDA | Interproscan |
CC | GO:0005737 | cytoplasm | ISM | Interproscan |
CC | GO:0005773 | vacuole | IDA | Interproscan |
CC | GO:0005829 | cytosol | IDA | Interproscan |
CC | GO:0005829 | cytosol | TAS | Interproscan |
BP | GO:0006096 | glycolytic process | RCA | Interproscan |
BP | GO:0006598 | polyamine catabolic process | RCA | Interproscan |
BP | GO:0006816 | calcium ion transport | RCA | Interproscan |
BP | GO:0006833 | water transport | RCA | Interproscan |
BP | GO:0006970 | response to osmotic stress | RCA | Interproscan |
BP | GO:0006972 | hyperosmotic response | RCA | Interproscan |
BP | GO:0007030 | Golgi organization | RCA | Interproscan |
BP | GO:0009266 | response to temperature stimulus | RCA | Interproscan |
CC | GO:0009570 | chloroplast stroma | IDA | Interproscan |
BP | GO:0009651 | response to salt stress | IEP | Interproscan |
BP | GO:0009651 | response to salt stress | RCA | Interproscan |
BP | GO:0009698 | phenylpropanoid metabolic process | RCA | Interproscan |
BP | GO:0009744 | response to sucrose | RCA | Interproscan |
BP | GO:0009749 | response to glucose | RCA | Interproscan |
BP | GO:0009750 | response to fructose | RCA | Interproscan |
CC | GO:0009941 | chloroplast envelope | IDA | Interproscan |
CC | GO:0022626 | cytosolic ribosome | IDA | Interproscan |
BP | GO:0030003 | cellular monoatomic cation homeostasis | RCA | Interproscan |
BP | GO:0042128 | nitrate assimilation | TAS | Interproscan |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | RCA | Interproscan |
BP | GO:0042744 | hydrogen peroxide catabolic process | RCA | Interproscan |
BP | GO:0046686 | response to cadmium ion | RCA | Interproscan |
CC | GO:0048046 | apoplast | IDA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | HCCA |
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
BP | GO:0003008 | system process | IEP | HCCA |
BP | GO:0003013 | circulatory system process | IEP | HCCA |
BP | GO:0003018 | vascular process in circulatory system | IEP | HCCA |
MF | GO:0004034 | aldose 1-epimerase activity | IEP | HCCA |
MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | HCCA |
MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | HCCA |
MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | HCCA |
BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
BP | GO:0006012 | galactose metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0006099 | tricarboxylic acid cycle | IEP | HCCA |
BP | GO:0006714 | sesquiterpenoid metabolic process | IEP | HCCA |
BP | GO:0006826 | iron ion transport | IEP | HCCA |
BP | GO:0007154 | cell communication | IEP | HCCA |
MF | GO:0008553 | P-type proton-exporting transporter activity | IEP | HCCA |
MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | HCCA |
BP | GO:0009051 | pentose-phosphate shunt, oxidative branch | IEP | HCCA |
BP | GO:0009267 | cellular response to starvation | IEP | HCCA |
BP | GO:0009309 | amine biosynthetic process | IEP | HCCA |
BP | GO:0009605 | response to external stimulus | IEP | HCCA |
MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
BP | GO:0009687 | abscisic acid metabolic process | IEP | HCCA |
BP | GO:0009688 | abscisic acid biosynthetic process | IEP | HCCA |
BP | GO:0009991 | response to extracellular stimulus | IEP | HCCA |
BP | GO:0010039 | response to iron ion | IEP | HCCA |
BP | GO:0010043 | response to zinc ion | IEP | HCCA |
BP | GO:0010054 | trichoblast differentiation | IEP | HCCA |
BP | GO:0010106 | cellular response to iron ion starvation | IEP | HCCA |
BP | GO:0010167 | response to nitrate | IEP | HCCA |
BP | GO:0010232 | vascular transport | IEP | HCCA |
BP | GO:0010233 | phloem transport | IEP | HCCA |
BP | GO:0010260 | obsolete animal organ senescence | IEP | HCCA |
BP | GO:0010315 | auxin export across the plasma membrane | IEP | HCCA |
BP | GO:0010383 | cell wall polysaccharide metabolic process | IEP | HCCA |
BP | GO:0010393 | galacturonan metabolic process | IEP | HCCA |
BP | GO:0010540 | basipetal auxin transport | IEP | HCCA |
BP | GO:0010541 | acropetal auxin transport | IEP | HCCA |
BP | GO:0010928 | regulation of auxin mediated signaling pathway | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015662 | P-type ion transporter activity | IEP | HCCA |
BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
BP | GO:0015706 | nitrate transmembrane transport | IEP | HCCA |
BP | GO:0016106 | sesquiterpenoid biosynthetic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | HCCA |
BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
MF | GO:0019829 | ATPase-coupled monoatomic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
MF | GO:0030410 | nicotianamine synthase activity | IEP | HCCA |
BP | GO:0030417 | nicotianamine metabolic process | IEP | HCCA |
BP | GO:0030418 | nicotianamine biosynthetic process | IEP | HCCA |
BP | GO:0031667 | response to nutrient levels | IEP | HCCA |
BP | GO:0031668 | cellular response to extracellular stimulus | IEP | HCCA |
BP | GO:0031669 | cellular response to nutrient levels | IEP | HCCA |
BP | GO:0032870 | cellular response to hormone stimulus | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0034406 | cell wall beta-glucan metabolic process | IEP | HCCA |
BP | GO:0042401 | biogenic amine biosynthetic process | IEP | HCCA |
BP | GO:0042594 | response to starvation | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
BP | GO:0043288 | apocarotenoid metabolic process | IEP | HCCA |
BP | GO:0043289 | apocarotenoid biosynthetic process | IEP | HCCA |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
MF | GO:0045431 | flavonol synthase activity | IEP | HCCA |
BP | GO:0045488 | pectin metabolic process | IEP | HCCA |
BP | GO:0051054 | positive regulation of DNA metabolic process | IEP | HCCA |
BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
BP | GO:0051338 | regulation of transferase activity | IEP | HCCA |
BP | GO:0051347 | positive regulation of transferase activity | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0051972 | regulation of telomerase activity | IEP | HCCA |
BP | GO:0051973 | positive regulation of telomerase activity | IEP | HCCA |
BP | GO:0052541 | plant-type cell wall cellulose metabolic process | IEP | HCCA |
BP | GO:0052546 | cell wall pectin metabolic process | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
BP | GO:0071241 | cellular response to inorganic substance | IEP | HCCA |
BP | GO:0071248 | cellular response to metal ion | IEP | HCCA |
BP | GO:0071281 | cellular response to iron ion | IEP | HCCA |
BP | GO:0071369 | cellular response to ethylene stimulus | IEP | HCCA |
BP | GO:0071495 | cellular response to endogenous stimulus | IEP | HCCA |
BP | GO:0071496 | cellular response to external stimulus | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0071731 | response to nitric oxide | IEP | HCCA |
BP | GO:0071732 | cellular response to nitric oxide | IEP | HCCA |
BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0072351 | tricarboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
BP | GO:0098661 | inorganic anion transmembrane transport | IEP | HCCA |
BP | GO:0140115 | export across plasma membrane | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
MF | GO:0140358 | P-type transmembrane transporter activity | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
BP | GO:1901698 | response to nitrogen compound | IEP | HCCA |
BP | GO:1901699 | cellular response to nitrogen compound | IEP | HCCA |
BP | GO:1902025 | nitrate import | IEP | HCCA |
BP | GO:1902170 | cellular response to reactive nitrogen species | IEP | HCCA |
BP | GO:1902644 | tertiary alcohol metabolic process | IEP | HCCA |
BP | GO:1902645 | tertiary alcohol biosynthetic process | IEP | HCCA |
BP | GO:2000278 | regulation of DNA biosynthetic process | IEP | HCCA |
BP | GO:2000573 | positive regulation of DNA biosynthetic process | IEP | HCCA |
No external refs found! |