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AT1G65540


Description : LETM1-like protein


Gene families : OG0002125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G65540

Target Alias Description ECC score Gene Family Method Actions
Azfi_s2240.g109970 No alias ribosome docking factor *(MDM38) & original description:... 0.03 OrthoFinder output from all 47 species
Cre15.g639150 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g10876 No alias ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004001001 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01038211001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g39550.1 LOC_Os02g39550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_54505g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003978 UDP-glucose 4-epimerase activity IEP HCCA
MF GO:0004108 citrate (Si)-synthase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004805 trehalose-phosphatase activity IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006152 purine nucleoside catabolic process IEP HCCA
BP GO:0006213 pyrimidine nucleoside metabolic process IEP HCCA
BP GO:0006218 uridine catabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008477 purine nucleosidase activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009164 nucleoside catabolic process IEP HCCA
BP GO:0009292 horizontal gene transfer IEP HCCA
BP GO:0009294 DNA-mediated transformation IEP HCCA
BP GO:0009561 megagametogenesis IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
MF GO:0036440 citrate synthase activity IEP HCCA
BP GO:0042278 purine nucleoside metabolic process IEP HCCA
BP GO:0042454 ribonucleoside catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
MF GO:0045437 uridine nucleosidase activity IEP HCCA
BP GO:0046108 uridine metabolic process IEP HCCA
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP HCCA
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP HCCA
BP GO:0046135 pyrimidine nucleoside catabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0047622 adenosine nucleosidase activity IEP HCCA
MF GO:0047724 inosine nucleosidase activity IEP HCCA
MF GO:0050263 ribosylpyrimidine nucleosidase activity IEP HCCA
MF GO:0050373 UDP-arabinose 4-epimerase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070063 RNA polymerase binding IEP HCCA
BP GO:0072523 purine-containing compound catabolic process IEP HCCA
BP GO:0072529 pyrimidine-containing compound catabolic process IEP HCCA
MF GO:0072585 xanthosine nucleotidase activity IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!