Aliases : PHE2, AGL38
Description : AGAMOUS-like 38
Gene families : OG0013358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013358_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT1G65300 | |
Cluster | HCCA: Cluster_35 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G31640 | AGL92 | AGAMOUS-like 92 | 0.12 | OrthoFinder output from all 47 species | |
AT5G26650 | AGL36 | AGAMOUS-like 36 | 0.06 | OrthoFinder output from all 47 species | |
AT5G27960 | AGL90 | AGAMOUS-like 90 | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | ISS | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000156 | phosphorelay response regulator activity | IEP | HCCA |
MF | GO:0003886 | DNA (cytosine-5-)-methyltransferase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0009008 | DNA-methyltransferase activity | IEP | HCCA |
BP | GO:0009691 | cytokinin biosynthetic process | IEP | HCCA |
MF | GO:0009824 | AMP dimethylallyltransferase activity | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0042991 | obsolete transcription factor import into nucleus | IEP | HCCA |
CC | GO:0042995 | cell projection | IEP | HCCA |
MF | GO:0052622 | ATP dimethylallyltransferase activity | IEP | HCCA |
MF | GO:0052623 | ADP dimethylallyltransferase activity | IEP | HCCA |
BP | GO:0060688 | regulation of morphogenesis of a branching structure | IEP | HCCA |
CC | GO:0090406 | pollen tube | IEP | HCCA |
CC | GO:0120025 | plasma membrane bounded cell projection | IEP | HCCA |
BP | GO:1905428 | regulation of plant organ formation | IEP | HCCA |
BP | GO:2000032 | regulation of secondary shoot formation | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002100 | TF_MADSbox | 10 | 51 |
No external refs found! |