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AT1G63170


Description : Zinc finger, C3HC4 type (RING finger) family protein


Gene families : OG0001080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G63170

Target Alias Description ECC score Gene Family Method Actions
Aev_g45029 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11654 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50746 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 324 366
No external refs found!