AT1G61570 (TIM13)

Aliases : TIM13

Description : translocase of the inner mitochondrial membrane 13

Gene families : OG0002244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002244_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G61570
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00198440	evm_27.TU.AmTr_v1...	Protein translocation.mitochondrion.inner mitochondrion...	0.07	OrthoFinder output from all 47 species
AMTR_s00095p00164310	evm_27.TU.AmTr_v1...	Protein translocation.mitochondrion.inner mitochondrion...	0.04	OrthoFinder output from all 47 species
Adi_g106233	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g37020	TIM8	component *(Tim8) of inner mitochondrion membrane TIM22...	0.04	OrthoFinder output from all 47 species
Azfi_s0095.g043565	TIM8	component *(Tim8) of inner mitochondrion membrane TIM22...	0.05	OrthoFinder output from all 47 species
Ceric.13G049400.1	TIM8, Ceric.13G049400	component *(Tim8) of inner mitochondrion membrane TIM22...	0.15	OrthoFinder output from all 47 species
Ceric.32G011900.1	TIM13, Ceric.32G011900	component *(Tim13) of inner mitochondrion membrane TIM22...	0.06	OrthoFinder output from all 47 species
Cre16.g650800	No alias	Protein translocation.mitochondrion.inner mitochondrion...	0.04	OrthoFinder output from all 47 species
Dac_g46325	TIM13	component *(Tim13) of inner mitochondrion membrane TIM22...	0.06	OrthoFinder output from all 47 species
GSVIVT01008600001	No alias	Protein translocation.mitochondrion.inner mitochondrion...	0.13	OrthoFinder output from all 47 species
Gb_35115	No alias	component Tim8 of inner mitochondrion membrane TIM22...	0.04	OrthoFinder output from all 47 species
LOC_Os02g45820.1	LOC_Os02g45820	component Tim13 of inner mitochondrion membrane TIM22...	0.03	OrthoFinder output from all 47 species
LOC_Os08g42380.1	LOC_Os08g42380	component Tim8 of inner mitochondrion membrane TIM22...	0.1	OrthoFinder output from all 47 species
LOC_Os11g03710.1	LOC_Os11g03710	component Tim8 of inner mitochondrion membrane TIM22...	0.03	OrthoFinder output from all 47 species
Lfl_g23333	No alias	component *(Tim13) of inner mitochondrion membrane TIM22...	0.04	OrthoFinder output from all 47 species
Lfl_g37009	No alias	component *(Tim13) of inner mitochondrion membrane TIM22...	0.08	OrthoFinder output from all 47 species
MA_119926g0010	TIM8	component Tim8 of inner mitochondrion membrane TIM22...	0.1	OrthoFinder output from all 47 species
MA_15606g0010	TIM13	component Tim13 of inner mitochondrion membrane TIM22...	0.05	OrthoFinder output from all 47 species
Mp2g07600.1	No alias	component Tim13 of inner mitochondrion membrane TIM22...	0.03	OrthoFinder output from all 47 species
Mp3g04200.1	No alias	component Tim8 of inner mitochondrion membrane TIM22...	0.02	OrthoFinder output from all 47 species
Msp_g23256	TIM8	component *(Tim8) of inner mitochondrion membrane TIM22...	0.05	OrthoFinder output from all 47 species
Nbi_g11345	No alias	component *(Tim13) of inner mitochondrion membrane TIM22...	0.03	OrthoFinder output from all 47 species
Pir_g16055	TIM13	component *(Tim13) of inner mitochondrion membrane TIM22...	0.03	OrthoFinder output from all 47 species
Pp3c22_9040V3.1	Pp3c22_9040	translocase inner membrane subunit 8	0.03	OrthoFinder output from all 47 species
Smo228905	No alias	Protein translocation.mitochondrion.inner mitochondrion...	0.09	OrthoFinder output from all 47 species
Smo82076	TIM8	Protein translocation.mitochondrion.inner mitochondrion...	0.07	OrthoFinder output from all 47 species
Solyc06g072600.3.1	TIM8, Solyc06g072600	component Tim8 of inner mitochondrion membrane TIM22...	0.05	OrthoFinder output from all 47 species
Zm00001e003692_P001	TIM8, Zm00001e003692	component Tim8 of inner mitochondrion membrane TIM22...	0.05	OrthoFinder output from all 47 species
Zm00001e021994_P001	TIM8, Zm00001e021994	component Tim8 of inner mitochondrion membrane TIM22...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005743	mitochondrial inner membrane	ISS	Interproscan
CC	GO:0005758	mitochondrial intermembrane space	IDA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006626	protein targeting to mitochondrion	ISS	Interproscan
BP	GO:0006626	protein targeting to mitochondrion	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006839	mitochondrial transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008320	protein transmembrane transporter activity	None	Extended
BP	GO:0009451	RNA modification	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015450	protein-transporting ATPase activity	ISS	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
CC	GO:0019866	organelle inner membrane	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022884	macromolecule transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031966	mitochondrial membrane	None	Extended
CC	GO:0031970	organelle envelope lumen	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
BP	GO:0070585	protein localization to mitochondrion	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072655	establishment of protein localization to mitochondrion	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140318	protein transporter activity	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000036	acyl carrier activity	IEP	HCCA
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
CC	GO:0022625	cytosolic large ribosomal subunit	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0042335	cuticle development	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
MF	GO:0044620	ACP phosphopantetheine attachment site binding	IEP	HCCA
MF	GO:0050897	cobalt ion binding	IEP	HCCA
MF	GO:0051192	prosthetic group binding	IEP	HCCA
BP	GO:0071433	cell wall repair	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140414	phosphopantetheine-dependent carrier activity	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004217	Tim10-like	25	83

External Links

No external refs found!

AT1G61570 (TIM13)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation