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AT1G60780 (HAP13)


Aliases : HAP13

Description : Clathrin adaptor complexes medium subunit family protein


Gene families : OG0003200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G60780

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00250090 HAP13,... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
Aev_g12966 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Ala_g12148 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
Aob_g03410 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Cba_g06963 HAP13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32283 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021181.5 HAP13 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Cre06.g262250 HAP13 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
Dcu_g08729 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Dcu_g08796 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Ehy_g19498 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Ehy_g29018 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
GSVIVT01004093001 HAP13 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.09 OrthoFinder output from all 47 species
LOC_Os01g50770.1 HAP13, LOC_Os01g50770 medium subunit mu of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
LOC_Os05g46550.1 HAP13, LOC_Os05g46550 medium subunit mu of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Lfl_g06990 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
MA_10428553g0010 HAP13 AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g15960.1 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
Msp_g12532 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Ppi_g03776 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.07 OrthoFinder output from all 47 species
Smo91068 HAP13 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder output from all 47 species
Solyc04g026360.3.1 HAP13, Solyc04g026360 AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Solyc04g026380.4.1 HAP13, Solyc04g026380 AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Solyc05g013340.3.1 HAP13, Solyc05g013340 medium subunit mu of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Zm00001e020037_P003 HAP13, Zm00001e020037 AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006886 intracellular protein transport ISS Interproscan
CC GO:0030125 clathrin vesicle coat ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
CC GO:0009504 cell plate IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0010289 homogalacturonan biosynthetic process IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
BP GO:0010394 homogalacturonan metabolic process IEP HCCA
MF GO:0010427 abscisic acid binding IEP HCCA
CC GO:0012505 endomembrane system IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
MF GO:0019840 isoprenoid binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019953 sexual reproduction IEP HCCA
CC GO:0030054 cell junction IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0045489 pectin biosynthetic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0052325 cell wall pectin biosynthetic process IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 7 128
IPR028565 MHD 159 426
No external refs found!