AT1G59970

Description : Matrixin family protein

Gene families : OG0002614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002614_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G59970

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00055p00201730	MMP,...	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species
AT1G70170	MMP	matrix metalloproteinase	0.04	OrthoFinder output from all 47 species
Dac_g19787	MMP	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Ehy_g30544	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
GSVIVT01018206001	No alias	Protein degradation.peptidase families.metallopeptidase...	0.03	OrthoFinder output from all 47 species
GSVIVT01032545001	MMP	Protein degradation.peptidase families.metallopeptidase...	0.04	OrthoFinder output from all 47 species
GSVIVT01032546001	MMP	Protein degradation.peptidase families.metallopeptidase...	0.05	OrthoFinder output from all 47 species
Gb_39954	MMP	Matrixin-type metalloprotease	0.03	OrthoFinder output from all 47 species
Gb_39955	MMP	Matrixin-type metalloprotease	0.03	OrthoFinder output from all 47 species
LOC_Os10g40830.1	LOC_Os10g40830	Matrixin-type metalloprotease	0.03	OrthoFinder output from all 47 species
MA_10426152g0010	No alias	Matrixin-type metalloprotease	0.02	OrthoFinder output from all 47 species
Smo110370	No alias	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006508	proteolysis	ISS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0031225	obsolete anchored component of membrane	TAS	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002477	Peptidoglycan-bd-like	59	113
IPR001818	Pept_M10_metallopeptidase	152	314

External Links

No external refs found!