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AT1G56680


Description : Chitinase family protein


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G56680
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Als_g35616 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21647 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01038113001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01038114001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_29993 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_34557 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os05g04690.1 LOC_Os05g04690 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Pir_g16816 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0247.g026716 ATEP3, EP3,... not classified & original description: CDS=1-465 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000811 GINS complex IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009900 dehiscence IEP HCCA
BP GO:0009901 anther dehiscence IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
CC GO:0031261 DNA replication preinitiation complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0046976 histone H3K27 methyltransferase activity IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0070734 histone H3-K27 methylation IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
MF GO:0140938 histone H3 methyltransferase activity IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 87 226
No external refs found!