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AT1G55590


Description : RNI-like superfamily protein


Gene families : OG0003498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003498_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G55590

Target Alias Description ECC score Gene Family Method Actions
Cba_g34058 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01014858001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000956 nuclear-transcribed mRNA catabolic process RCA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000785 chromatin IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0048316 seed development IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 413 433
IPR001810 F-box_dom 10 36
No external refs found!