AT1G51530

Description : RNA-binding (RRM/RBD/RNP motifs) family protein

Gene families : OG0000627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G51530
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT2G05160	No alias	CCCH-type zinc fingerfamily protein with RNA-binding domain	0.04	OrthoFinder output from all 47 species
Mp5g21520.1	No alias	C3H zinc finger transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	ND	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004407	histone deacetylase activity	IEP	HCCA
BP	GO:0009910	negative regulation of flower development	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
MF	GO:0019213	deacetylase activity	IEP	HCCA
MF	GO:0033558	protein lysine deacetylase activity	IEP	HCCA
BP	GO:0042752	regulation of circadian rhythm	IEP	HCCA
BP	GO:2000242	negative regulation of reproductive process	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!