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AT1G50590


Description : RmlC-like cupins superfamily protein


Gene families : OG0002091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G50590

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00186610 evm_27.TU.AmTr_v1... Pirin-like protein OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
Aop_g39259 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Aop_g55113 No alias transcriptional co-regulator *(Pirin) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0011.g012617 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01037758001 No alias Pirin-like protein OS=Solanum lycopersicum 0.04 OrthoFinder output from all 47 species
Gb_11625 No alias Pirin-like protein OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Gb_37035 No alias Pirin-like protein OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
LOC_Os08g27720.1 LOC_Os08g27720 Pirin-like protein OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Len_g23606 No alias transcriptional co-regulator *(Pirin) & original... 0.02 OrthoFinder output from all 47 species
Solyc09g098160.3.1 Solyc09g098160 Pirin-like protein OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
Solyc12g014590.3.1 Solyc12g014590 Pirin-like protein At1g50590 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g25433 No alias transcriptional co-regulator *(Pirin) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e025778_P001 Zm00001e025778 Pirin-like protein OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006950 response to stress IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009804 coumarin metabolic process IEP HCCA
BP GO:0009805 coumarin biosynthetic process IEP HCCA
BP GO:0009877 nodulation IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003829 Pirin_N_dom 33 129
IPR008778 Pirin_C_dom 182 292
No external refs found!