AT1G50140

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G50140

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00247870	evm_27.TU.AmTr_v1...	ATPase family AAA domain-containing protein FIGL1...	0.03	OrthoFinder output from all 47 species
Adi_g024938	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g061008	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g076970	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g12598	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g14020	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g27974	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g02714	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g02617	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g20700	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g14828	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g30592	No alias	EC_3.6 hydrolase acting on acid anhydride & original...	0.02	OrthoFinder output from all 47 species
Aop_g60689	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene13979.t1	Aspi01Gene13979	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene38633.t1	Aspi01Gene38633	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0009.g011959	No alias	not classified & original description: CDS=1-2292	0.03	OrthoFinder output from all 47 species
Cba_g05976	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g07758	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g62281	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.02G079000.1	Ceric.02G079000	not classified & original description: pacid=50585939...	0.04	OrthoFinder output from all 47 species
Ceric.14G049600.1	Ceric.14G049600	not classified & original description: pacid=50633231...	0.05	OrthoFinder output from all 47 species
Ceric.1Z097100.1	Ceric.1Z097100	not classified & original description: pacid=50640984...	0.06	OrthoFinder output from all 47 species
Dac_g45574	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g13726	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g21489	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g31555	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Dcu_g43976	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g15909	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01012038001	No alias	ATPase family AAA domain-containing protein FIGL1...	0.04	OrthoFinder output from all 47 species
GSVIVT01027983001	No alias	ATPase family AAA domain-containing protein FIGL1...	0.03	OrthoFinder output from all 47 species
LOC_Os07g47530.1	LOC_Os07g47530	ATPase family AAA domain-containing protein FIGL1...	0.02	OrthoFinder output from all 47 species
Lfl_g04238	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g09487	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g17632	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10428622g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_199195g0010	No alias	ATPase family AAA domain-containing protein FIGL1...	0.03	OrthoFinder output from all 47 species
MA_48428g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_896563g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Msp_g24317	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g04513	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g59905	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g29682	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc09g074950.3.1	Solyc09g074950	ATPase family AAA domain-containing protein FIGL1...	0.04	OrthoFinder output from all 47 species
Tin_g13557	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e021043_P002	Zm00001e021043	ATPase family AAA domain-containing protein FIGL1...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	None	Extended
BP	GO:0000723	telomere maintenance	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007059	chromosome segregation	None	Extended
BP	GO:0007062	sister chromatid cohesion	RCA	Interproscan
BP	GO:0007129	homologous chromosome pairing at meiosis	RCA	Interproscan
BP	GO:0007131	reciprocal meiotic recombination	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009887	animal organ morphogenesis	RCA	Interproscan
BP	GO:0009888	tissue development	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010212	response to ionizing radiation	None	Extended
BP	GO:0010332	response to gamma radiation	RCA	Interproscan
BP	GO:0010638	positive regulation of organelle organization	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISS	Interproscan
BP	GO:0016926	protein desumoylation	RCA	Interproscan
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0032200	telomere organization	None	Extended
BP	GO:0032204	regulation of telomere maintenance	RCA	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032504	multicellular organism reproduction	RCA	Interproscan
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033044	regulation of chromosome organization	RCA	Interproscan
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035825	homologous recombination	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042138	meiotic DNA double-strand break formation	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043247	telomere maintenance in response to DNA damage	RCA	Interproscan
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045132	meiotic chromosome segregation	RCA	Interproscan
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061982	meiosis I cell cycle process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	None	Extended
BP	GO:0098813	nuclear chromosome segregation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140527	reciprocal homologous recombination	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1903046	meiotic cell cycle process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006268	DNA unwinding involved in DNA replication	IEP	HCCA
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0006349	regulation of gene expression by genomic imprinting	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006402	mRNA catabolic process	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0006513	protein monoubiquitination	IEP	HCCA
BP	GO:0006839	mitochondrial transport	IEP	HCCA
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
BP	GO:0009616	RNAi-mediated antiviral immune response	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0009910	negative regulation of flower development	IEP	HCCA
BP	GO:0010048	vernalization response	IEP	HCCA
BP	GO:0010050	vegetative phase change	IEP	HCCA
BP	GO:0010162	seed dormancy process	IEP	HCCA
BP	GO:0010267	ta-siRNA processing	IEP	HCCA
BP	GO:0010390	histone monoubiquitination	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0016441	post-transcriptional gene silencing	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
BP	GO:0016574	histone ubiquitination	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
BP	GO:0022611	dormancy process	IEP	HCCA
BP	GO:0030422	siRNA processing	IEP	HCCA
BP	GO:0031048	RNA-mediated heterochromatin formation	IEP	HCCA
BP	GO:0031507	heterochromatin formation	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0032392	DNA geometric change	IEP	HCCA
BP	GO:0032508	DNA duplex unwinding	IEP	HCCA
BP	GO:0033523	histone H2B ubiquitination	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0035194	RNA-mediated post-transcriptional gene silencing	IEP	HCCA
BP	GO:0035196	miRNA processing	IEP	HCCA
BP	GO:0040029	epigenetic regulation of gene expression	IEP	HCCA
MF	GO:0042802	identical protein binding	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0043687	post-translational protein modification	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0048581	negative regulation of post-embryonic development	IEP	HCCA
BP	GO:0051093	negative regulation of developmental process	IEP	HCCA
BP	GO:0051241	negative regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051607	defense response to virus	IEP	HCCA
BP	GO:0070828	heterochromatin organization	IEP	HCCA
BP	GO:0070918	regulatory ncRNA processing	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
BP	GO:0140546	defense response to symbiont	IEP	HCCA
BP	GO:0140718	facultative heterochromatin formation	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:2000242	negative regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	752	882

External Links

No external refs found!

AT1G50140

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation