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  5. AT1G49840

AT1G49840


Description : Protein of unknown function (DUF620)


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49840
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Adi_g019549 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02181 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49886.t1 Aspi01Gene49886 GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G055700.1 Ceric.22G055700 GTPase effector *(BDR) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g41584 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033432001 No alias Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
GSVIVT01036716001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_36126 No alias GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Pir_g14757 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g052860.3.1 Solyc05g052860 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Zm00001e001181_P001 Zm00001e001181 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Zm00001e010682_P001 Zm00001e010682 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Zm00001e035436_P001 Zm00001e035436 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030048 actin filament-based movement IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 199 439
No external refs found!