AT1G49120

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G49120
Cluster	HCCA: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00034p00206140	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AT1G03800	ATERF10, ERF10	ERF domain protein 10	0.04	OrthoFinder output from all 47 species
AT1G12980	ESR1, DRN	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT1G71450	No alias	Integrase-type DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
Adi_g001518	ATERF12, ERF12	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g050305	No alias	subgroup ERF-V transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g106006	ATERF12, ERF12	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g02425	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g21811	DEAR2	subgroup ERF-II transcription factor *(ERF19/20) &...	0.02	OrthoFinder output from all 47 species
Ala_g08073	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Als_g38639	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aob_g32179	No alias	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.03	OrthoFinder output from all 47 species
Aop_g00507	WIN1, SHN1	subgroup ERF-V transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g07767	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Aop_g11367	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g35542	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aop_g38332	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene01047.t1	Aspi01Gene01047	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene08500.t1	ATERF3, ERF3,...	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene24402.t1	DEAR2, Aspi01Gene24402	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28739.t1	Aspi01Gene28739	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene34450.t1	Aspi01Gene34450	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene34451.t1	Aspi01Gene34451	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene43206.t1	ERF7, ATERF7,...	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene47254.t1	TINY2, Aspi01Gene47254	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene47263.t1	tny, Aspi01Gene47263	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene49723.t1	HRE2, Aspi01Gene49723	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Aspi01Gene62044.t2	CRF3, Aspi01Gene62044	subgroup ERF-VI transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene62684.t2	DREB26, Aspi01Gene62684	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene63662.t1	HRE2, Aspi01Gene63662	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g07660	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g23893	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Cba_g24352	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Cba_g49106	No alias	subgroup ERF-V transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.13G085100.1	Ceric.13G085100	not classified & original description: pacid=50636474...	0.03	OrthoFinder output from all 47 species
Ceric.32G042500.1	CRF3, Ceric.32G042500	subgroup ERF-VI transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000093.224	No alias	No description available	0.02	OrthoFinder output from all 47 species
Dac_g09321	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Dcu_g02595	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Dcu_g04654	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.03	OrthoFinder output from all 47 species
Dcu_g08328	LEP	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g23766	No alias	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g08064	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g19243	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g06062	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g21774	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g25390	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
GSVIVT01009007001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01010629001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01017542001	No alias	Ethylene-responsive transcription factor ERF084...	0.03	OrthoFinder output from all 47 species
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Gb_29220	ERF-1, ATERF-1	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os02g45450.1	CBF4, DREB1D,...	Dehydration-responsive element-binding protein 1G...	0.02	OrthoFinder output from all 47 species
LOC_Os02g54160.2	RAP2.2, LOC_Os02g54160	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os03g07830.1	LOC_Os03g07830	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
LOC_Os08g07700.1	LOC_Os08g07700	Ethylene-responsive transcription factor ERF087...	0.03	OrthoFinder output from all 47 species
LOC_Os08g36920.1	RRTF1, LOC_Os08g36920	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Len_g38064	CRF3	subgroup ERF-VI transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g15284	No alias	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_269802g0010	ORA47	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
MA_77420g0010	DRN-LIKE, ESR2,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Msp_g35618	ERF110	subgroup ERF-X transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g03908	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g40725	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g17077	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Pir_g18632	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g28144	DDF1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g15310	TINY2	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ppi_g17524	No alias	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g22142	tny	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004888	No alias	not classified & original description: CDS=1-1152	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015276	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021258	CRF5	subgroup ERF-VI transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023147	No alias	not classified & original description: CDS=1-1539	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023700	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sam_g34704	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g52552	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Solyc06g035700.1.1	Solyc06g035700	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Solyc11g042560.1.1	Solyc11g042560	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Spa_g04537	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Zm00001e026989_P001	ERF110, Zm00001e026989	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	85	126

External Links

No external refs found!

AT1G49120

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation