AT1G48500 (JAZ4, TIFY6A)

Aliases : JAZ4, TIFY6A

Description : jasmonate-zim-domain protein 4

Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G48500

Target	Alias	Description	ECC score	Gene Family Method
Adi_g071330	No alias	TIFY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g41299	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g35232	PPD2, TIFY4B	TIFY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene26719.t1	JAZ9, TIFY7,...	TIFY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene26946.t1	TIFY10B, JAZ2,...	TIFY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene67664.t1	JAI3, JAZ3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_24133	JAI3, JAZ3, TIFY6B	transcription factor (TIFY)	0.03	OrthoFinder output from all 47 species
Gb_24143	TIFY10B, JAZ2	transcription factor (TIFY)	0.03	OrthoFinder output from all 47 species
MA_10430801g0010	No alias	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
MA_10436815g0010	JAZ12, TIFY3B	transcription factor (TIFY)	0.06	OrthoFinder output from all 47 species
MA_14247g0030	JAZ12, TIFY3B	transcription factor (TIFY)	0.03	OrthoFinder output from all 47 species
MA_880464g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Ppi_g55533	JAZ4, TIFY6A	TIFY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009611	response to wounding	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009867	jasmonic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018467	CCT_CS	259	284
IPR010399	Tify_dom	143	175

External Links

No external refs found!