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  5. AT1G48390

AT1G48390


Description : RNI-like superfamily protein


Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G48390
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT2G29910 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G49150 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006446 regulation of translational initiation IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010099 regulation of photomorphogenesis IEP HCCA
BP GO:0010114 response to red light IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
MF GO:0010178 IAA-amino acid conjugate hydrolase activity IEP HCCA
MF GO:0010179 IAA-Ala conjugate hydrolase activity IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
MF GO:0015450 protein-transporting ATPase activity IEP HCCA
MF GO:0015462 ABC-type protein transporter activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
BP GO:2000030 regulation of response to red or far red light IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!