AT1G47270 (TLP6, AtTLP6)

Aliases : TLP6, AtTLP6

Description : tubby like protein 6

Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G47270

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00040910	TLP10, AtTLP10,...	RNA biosynthesis.transcriptional activation.TUB...	0.02	OrthoFinder output from all 47 species
Ala_g07545	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Als_g01736	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g58856	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene26806.t1	AtTLP3, TLP3,...	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene26939.t1	AtTLP3, TLP3,...	TUB-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene72676.t1	AtTLP3, TLP3,...	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g06633	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g24072	TLP10, AtTLP10	TUB-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g09266	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g31683	AtTLP1, TLP1	TUB-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018709	AtTLP3, TLP3	TUB-type transcription factor & original description:...	0.01	OrthoFinder output from all 47 species
Solyc10g046970.2.1	TLP10, AtTLP10,...	transcription factor (TUB)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
MF	GO:0008081	phosphoric diester hydrolase activity	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009555	pollen development	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000007	Tubby_C	132	408
IPR001810	F-box_dom	69	118

External Links

No external refs found!

AT1G47270 (TLP6, AtTLP6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation