1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G36990

AT1G36990


Description : unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink).


Gene families : OG0001424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001424_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G36990
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Aob_g03593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g65351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo446136 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g104540.3.1 Solyc01g104540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000741 karyogamy IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0003923 GPI-anchor transamidase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007160 cell-matrix adhesion IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0008305 integrin complex IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
BP GO:0031589 cell-substrate adhesion IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0043235 receptor complex IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
CC GO:0098636 protein complex involved in cell adhesion IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0098802 plasma membrane signaling receptor complex IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA

No InterPro domains available for this sequence

No external refs found!